ENST00000454060.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000454060.1 |
Source |
Gencode19 |
Same with |
lnc-TRPC4-1:3,NONHSAT033263 |
Classification |
intergenic |
Length |
525 nt |
Genomic location |
chr13-:38627835..38635585 |
Exon number |
2 |
Exons |
38627835..38628306,38635533..38635585 |
Genome context |
|
Sequence |
000001 AGAAACTTCA TCTGCATTGG CTTCGGCAAA GCAGAAATTT ATTAGCTTAC AAGGGAGAGT GGATTGTCAT TGAGACATAT 000080
000081 GTTCTGCTTA CGTGGAGAGT AACTTGAGCA ACGTTACCCA CCTCTATGTG GAAACACAGG TTTATTTAGT ATGTTGAAAT 000160 000161 TCCAGACATA ACTATCTGTT CAGTAGCAGT GGTTCCTATA AGACAACAAC TTCACTGTTC ATTTTGTGCT AGTAGAATGG 000240 000241 AACTTCACGG ACCTTGGAGA AGCATACTCC AAACACTACA AATGATGGTT ATACTTTGGA GAGATGCTAA GACAGCAGAT 000320 000321 GCTAAAATCC AGATACCTTT TGTGAATATG AGGCATATCT ACTGGGAACA CATCATAATA ATCTGTTGAG GTAAACATTA 000400 000401 AAGATGGTGG CAATAAGCAG TTGGAGAAAA AGAAAAATAT CAACATGCAA GGCACCATTG TTTTCTTGCT TCTTAATTGT 000480 000481 AACTTTTTAT TTTTTGTGTA TATGGCTATC ACAGAGATTT AAAAA |
Predicted Small Protein
Name | ENST00000454060.1_smProtein_236:388 |
Length | 51 |
Molecular weight | 6061.2428 |
Aromaticity | 0.1 |
Instability index | 57.06 |
Isoelectric point | 7.99847412109 |
Runs | 8 |
Runs residual | 0.0046783625731 |
Runs probability | 0.0444709415299 |
Amino acid sequence | MELHGPWRSILQTLQMMVILWRDAKTADAKIQIPFVNMRHIYWEHIIIIC |
Secondary structure | LLLLLLHHHHHHHHHHHHHHHHHHHLLLLLEEEEELLLHHHHHHHHEEEL |
PRMN | - |
PiMo | - |