ENST00000453936.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000453936.1

Source

Gencode19

Same with

lnc-MCFD2-1:1,NONHSAT070531

Classification

intergenic

Length

652 nt

Genomic location

chr2-:47079159..47080635

Exon number

2

Exons

47079159..47079707,47080533..47080635

Genome context

Sequence
000001 TTTACCTTTG ATCCTACCCC AAGGCCTGCC AGAATGAAAA TAAAGAACAA AGACAACAAA GAAAACAGCC GACAGGAACA 000080
000081 GGATCTTGGG AGCCAAATAT CAGGGTCTCA CTCTGTCACC CTGGCTAGAG TGCAGTGGTG CAATCTCAAC TCACTGCAGT 000160
000161 GTCAACCTTC TGGGCTCGAG TGATCCTCCC ACCTCAGCCT CCTGAGTAAC TGGGACCACA GGTGCATACT ACCACACCTG 000240
000241 GCTAATTTTT GTATTTTTCG TAGAGACGGG GTTTTGCTAT GTTCCCCAGG CTGGTCGTGA ACTCCTGAAC TCAAGCAATC 000320
000321 CCCCTGCCTT GGCCTCCCAG AGTGTTGGGA TTACAGGCGT GAGACACCAT GCCCGGCCTG GGCTCCCAAG TTTTTACTTT 000400
000401 GCTTTCACGT TCCCTGGAGT CTTCAGAGGG AGCATGGCTC TGTTGACACC GTGATTTCTG ACTTTTGGCC TCCAGAACTG 000480
000481 CGGGACAATA CATGTCTGTT GTTTAAAGCC ACCCAGTTTG TGATAATTAC AGCAGCCCTA GGAAGCAATA TACTTAGTAT 000560
000561 GGAAAAACAA TGTGAAATTT CTCATTAGTA ATTTTTTATG TGAATTAAAT GATTGATTTG ATAATATTCA TTTGGGTTAA 000640
000641 TACAAATATA TT
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Predicted Small Protein

Name ENST00000453936.1_smProtein_368:445
Length 26
Molecular weight 2669.0372
Aromaticity 0.08
Instability index 81.796
Isoelectric point 4.52960205078
Runs 5
Runs residual 0.00830188679245
Runs probability 0.0284755343579
Amino acid sequence MPGLGSQVFTLLSRSLESSEGAWLC
Secondary structure LLLLHHHHHHHHHHLLLLLLLLELL
PRMN -
PiMo -