ENST00000453529.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000453529.2

Source

Gencode19

Same with

lnc-DENND1A-3:1

Classification

intergenic

Length

2146 nt

Genomic location

chr9-:126768556..126771675

Exon number

2

Exons

126768556..126770370,126771345..126771675

Genome context

Sequence
000001 ATACATATAG GCACGCGATT CCGTCGCCAC CTCTCGGACC AGCAGCCCAC GTCCAACGCT GGGCCGACCC CAGATACACA 000080
000081 GGCAGTCGGG ATTCCCGCCC GGTGCGCTTG TCTATTCATC CCTCTGCGTC AGGCTGGGAC GCGCTCCGTC TGTAAAAGGC 000160
000161 TCAAACGCAT CTCCCGCCGC GGGGCGGGAT CTAGGGGCCC AGGCCCCGGG GTCCAGAGGC GGGTAACTTT GCTAATCTCC 000240
000241 CCCAGCGGCG GGGAACGTCG CGCAACCGCT GAGCCCTGTC CGCCGAGACT AAACAAGCAG AGGAACAGGC TGTAAACACA 000320
000321 CATCCTGACA CGCAGGGATG TTGCTCTTGG AGAATGTGAA GACAGTTTGC TTCTTGACAA GCGAGCGAAC GGGCGCCCAG 000400
000401 ATTTTTGCAG CCTTTCCGAG TCTCCCCCGA GGGAGAGGCG GCAGAGAAAA CGCCGGATTT GGGAGCCACC AGGGAAGGAT 000480
000481 CCGCGCAGGG GAGCCGCCCT CCTTGGCCCC AGACCCGCCT GCCTGGGGCC CCCTTTGCTC ACTGTCAATG TATGGTCTGA 000560
000561 AGCTCTGAGG ATGGTGCTGG GGACTGGGGT CGGGGGAAGC CTCTTGAATA ATAACTGCAA AGAAGAAAGA GGCGAGAACG 000640
000641 TCTCCCTAAC CTTGAAGCAG AAAGGACTGT GTTCTTAAAG CTGTTGGCTG CAGTCACAGG GCCAGTTGCC CGCCTCTGTT 000720
000721 CCCTGAGTAA AGTGTAACAT CTTCTGTCCT CCTGGCTTGC TTGCACCATT CAGCAAATTA TACTCCTTCC TTACCAAAGT 000800
000801 GGGAATGCTC AGGGAAGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTCCCC TCTGCACTGA GGCTGCTGTT AGAGATGTTA 000880
000881 CCAATTTAAA CCTTCCAGAA TCCTGGAGGT TTACATTTTG TAAAGGGAGG GGACACTCCT GGACTGTCAC AATCCCAATT 000960
000961 CTGGTTAGAG TGGCAGGGAC TGAACAAAGC CACCAACATG CAAAAGTCCA TCTCCAGAGT AGCATGCATG CCCCCAGGAA 001040
001041 ACCCCCAGTG GGATATGCTT CCTGCACTTT CCCCTTCTCT CTAACCTCTG TCTCCTGTTT GTAAGGCAGA GGAAGGGTGA 001120
001121 TTCCTTGCCA CTGCACAGGA ATGCAGGGTT AGGGTTATCT CCAAGAAAGG GTGGGGTGAG GCTGAGTCAC AGGGAGAGCA 001200
001201 GAAAAGCTCT GTATCTTCAA TGAGGACCCA CACACACACA CCTTTCCCAG GCTTGTGGGC CTCATTCAGC AAAGCAGGGA 001280
001281 GTGTTTTATA TTGATGCGAG AGGCTGTCAG TCAGCAGTAA ATCAGTTCAG GCATAGCTAT CTCTTTCTTT ACGAAATCAG 001360
001361 CTCATTGCCT TGGTCACACT ACACAGAAAA TCTGCTTATC ACCGCTATCG ACAATAAAAA TTAGTGGAGC CTTAGTTGTT 001440
001441 TCCGAAGAGG AACCCCGTGT CTGTGACATT AGAATAGATA AGTGGCTTGG CCTGTTGCAG GCAGAGAGAA GCCCAATTCC 001520
001521 TCCTCCTCTT CTCCCTGCAG CGATCTGAAC AATTCTGAAA CCGCCTCCCT GGGCGTCAGC TGAGCAGGTT GGGGAACTAA 001600
001601 CCAGGGCTCT CTCTCTAGGG CCCTGTTAAA TGCACTGAAC TTAAAATGAA ACACGAAGTG TGAATTTCAG GTTTGAACAT 001680
001681 GATGCATCAG GAAACGTGGA GGTTGGCAGC CCTTTTCCTC CCTCCTGCTT TTCAGTAGCA GGTATTAATA TTGTATTAAA 001760
001761 TGTTATGAGA AAGTAAAGGC TGCGGAGAGG AATGTGCTCA GATGCAATTT TGTCAAGGTT TTTATCTGTG ATTATGATTC 001840
001841 CAGATGTAGA AACTCCCGGA GGAGGGAAAT GAGGGGCTGC TGGCATGTGA CATGTGTTTT AAGGTGTTTG GCAGTGTTTC 001920
001921 TCAAAGTGGT GACAAAATGT TCAATTTTAT TACAGGGAAT TGGTAAAAGA AATATGAATA CTAGGTCAGA GATTGTTCAC 002000
002001 CTCAGCAAAA GGATTTACCA TTATTGATTA GGGTGCAGAA AGTATGTATC TAGGTCCTGC TTAAATCACA TTGTCAACAA 002080
002081 TATAAATCTG TCAGATCAGA TTTTTCTGAA AGAACAATTA TAACAAAATA CACTATAGCT AATTGC
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Predicted Small Protein

Name ENST00000453529.2_smProtein_1868:2026
Length 53
Molecular weight 6076.3304
Aromaticity 0.0769230769231
Instability index 60.2942307692
Isoelectric point 10.0736694336
Runs 8
Runs residual 0.00347674923946
Runs probability 0.0389617558736
Amino acid sequence MRGCWHVTCVLRCLAVFLKVVTKCSILLQGIGKRNMNTRSEIVHLSKRIYHY
Secondary structure LLLEEEEEHHHHHHHHHHHHHHHHHHHHLLLLEELLLLLLEEEEEEEEEEEL
PRMN LLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo oooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiii