ENST00000452900.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000452900.1 |
Source |
Gencode19 |
Same with |
lnc-PPEF1-1:1 |
Classification |
intergenic |
Length |
656 nt |
Genomic location |
chrX+:18908414..18912453 |
Exon number |
3 |
Exons |
18908414..18908746,18911323..18911456,18912265..18912453 |
Genome context |
|
Sequence |
000001 CCCTTTTGCA ACAAGGAAGC AGAAAAGACA AAAGCTATTT GCCAGCCTGG TGCGGGAATC AACAGAATAG AGAGATGGTT 000080
000081 CTGCTGCAAT TTCCATCAAG GGTGGCCAAG CCTCCAGTCT TCTTGTCCAG AAGTAAGTGG CATCAACCAA CTCTGCCAAA 000160 000161 CTGCATTTCC TGCCTCCTGA TCTGGGGTCT TTTCCTTTTC TTTTTTCACA CAGGGAGTAT TTCCATCCTC TCTGTCCAGG 000240 000241 CAGCTGAGCC TTGACAACCT CTCCTCCCCT TCACCATGCC CCGACTGATC TCCTAATGGA GCCCCACCCC TCGAGTCCCT 000320 000321 GGGCCTGTGG AAGAGTCCGT GAGACCAGAT GCTACAGCAA ATGTTCCAGA GAAATGAACC TAGAAAATGA TCCCGGGGTG 000400 000401 CTCCTTGCGG GGGAACACAG GACTCCTCAG CTCTATCTCT GTGGCTTTAA CATACATCAG TTTCAGGAAT CTCCAGCCTC 000480 000481 AACAGAGATA AATGCCAGCC AACCCAGCTC CCTGGCACCC CCACCTGGTC CTGCAAGAAC AGCTGACTGG CCATCTGCAC 000560 000561 GATCTGGTCC ACGTGGATGA TGCCCCCGAT GCTGGTCATC TCCGTGTCCG AGAGCAGCGT CAGCACCATG ATGGCTTCCA 000640 000641 CCAGCAGCTG CCGGTA |
Predicted Small Protein
Name | ENST00000452900.1_smProtein_74:253 |
Length | 60 |
Molecular weight | 6670.9077 |
Aromaticity | 0.135593220339 |
Instability index | 60.7322033898 |
Isoelectric point | 9.49847412109 |
Runs | 9 |
Runs residual | 0.0080858342404 |
Runs probability | 0.0377730671848 |
Amino acid sequence | MVLLQFPSRVAKPPVFLSRSKWHQPTLPNCISCLLIWGLFLFFFHTGSISILSVQAAEP |
Secondary structure | LEEEELLLLLLLLLEEELLLLLLLLLLHHHHHHHHHHHHHHHHHLLLLEEEEEEEELLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooo |