ENST00000452471.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000452471.1

Source

Gencode19

Same with

lnc-KIAA1324L-1:2,NONHSAT121804

Classification

antisense

Length

687 nt

Genomic location

chr7-:86413542..86415908

Exon number

3

Exons

86413542..86413973,86415373..86415463,86415745..86415908

Genome context

Sequence
000001 GGCTTCTGCA ACAGTTCTCG GATCACGCTG TCGTAGGACT TGCGGATGTT GGAGCGGCCC ACCTTCTCCG CCGTAGCGAT 000080
000081 GCAGATGTTG CGCAGGCGGG CTTCCTGCTC GAAGGCCTCG ATCCCTGTCT CCCCGTAATC ACCCTCGGAG GCTACTGTGG 000160
000161 ACACATGGCT ACATTTTTCT GTTAGTTCTT GAGATGAATA CCAGATGCTT CCTTGGATAC TGTATTTTGG ACACTAGGAA 000240
000241 GCAGGTCTCA CACAGGACTA GGAGACTCTG GACAAAATGG CCTATACTGA CTTATTTAGG CATAGGAATA TTGCTTCACT 000320
000321 CAGCCTGACT GAAATGGCAG GTGTCACCAA ACAGGTACTG TCATTACTTC TAGAATGAGT GCCTGGCTTC CACTGGATTT 000400
000401 ATGTACCACT ATGGAAGGCT TGGTGATAGG AGCCCTGTCT ATGCATAGCT TGACTTTGTT AAGAGGTTTC TGGCTAGCAC 000480
000481 TGGAGAGGCC ATCTCTTCTT GATACAATGA TTTTCTCATC TTCAAGTTAT ATTAATCAGG ACCTGAACCC CTCAGGGAGA 000560
000561 CAGAGAATGA AAGGACCTAA AAAATATCTG GACATTATTT TCTGGCAGCG AAGAATCACA GTGAAACAAT CCTAAACTGC 000640
000641 TGAAATTTCC TCTCCCATAG GGGTAGGAGT AATGAGAAAC TGCTCAA
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Predicted Small Protein

Name ENST00000452471.1_smProtein_374:634
Length 87
Molecular weight 9874.5355
Aromaticity 0.093023255814
Instability index 58.9720930233
Isoelectric point 9.73870849609
Runs 12
Runs residual 8.67754251998e-05
Runs probability 0.0261585114526
Amino acid sequence MSAWLPLDLCTTMEGLVIGALSMHSLTLLRGFWLALERPSLLDTMIFSSSSYINQDLNPS
GRQRMKGPKKYLDIIFWQRRITVKQS
Secondary structure LLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLEEEELLHHHHLLLLLL
LLEELLLLHHHHHHHHHHHHEEEELL
PRMN -
PiMo -