ENST00000452471.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000452471.1 |
Source |
Gencode19 |
Same with |
lnc-KIAA1324L-1:2,NONHSAT121804 |
Classification |
antisense |
Length |
687 nt |
Genomic location |
chr7-:86413542..86415908 |
Exon number |
3 |
Exons |
86413542..86413973,86415373..86415463,86415745..86415908 |
Genome context |
|
Sequence |
000001 GGCTTCTGCA ACAGTTCTCG GATCACGCTG TCGTAGGACT TGCGGATGTT GGAGCGGCCC ACCTTCTCCG CCGTAGCGAT 000080
000081 GCAGATGTTG CGCAGGCGGG CTTCCTGCTC GAAGGCCTCG ATCCCTGTCT CCCCGTAATC ACCCTCGGAG GCTACTGTGG 000160 000161 ACACATGGCT ACATTTTTCT GTTAGTTCTT GAGATGAATA CCAGATGCTT CCTTGGATAC TGTATTTTGG ACACTAGGAA 000240 000241 GCAGGTCTCA CACAGGACTA GGAGACTCTG GACAAAATGG CCTATACTGA CTTATTTAGG CATAGGAATA TTGCTTCACT 000320 000321 CAGCCTGACT GAAATGGCAG GTGTCACCAA ACAGGTACTG TCATTACTTC TAGAATGAGT GCCTGGCTTC CACTGGATTT 000400 000401 ATGTACCACT ATGGAAGGCT TGGTGATAGG AGCCCTGTCT ATGCATAGCT TGACTTTGTT AAGAGGTTTC TGGCTAGCAC 000480 000481 TGGAGAGGCC ATCTCTTCTT GATACAATGA TTTTCTCATC TTCAAGTTAT ATTAATCAGG ACCTGAACCC CTCAGGGAGA 000560 000561 CAGAGAATGA AAGGACCTAA AAAATATCTG GACATTATTT TCTGGCAGCG AAGAATCACA GTGAAACAAT CCTAAACTGC 000640 000641 TGAAATTTCC TCTCCCATAG GGGTAGGAGT AATGAGAAAC TGCTCAA |
Predicted Small Protein
Name | ENST00000452471.1_smProtein_374:634 |
Length | 87 |
Molecular weight | 9874.5355 |
Aromaticity | 0.093023255814 |
Instability index | 58.9720930233 |
Isoelectric point | 9.73870849609 |
Runs | 12 |
Runs residual | 8.67754251998e-05 |
Runs probability | 0.0261585114526 |
Amino acid sequence | MSAWLPLDLCTTMEGLVIGALSMHSLTLLRGFWLALERPSLLDTMIFSSSSYINQDLNPS GRQRMKGPKKYLDIIFWQRRITVKQS |
Secondary structure | LLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLEEEELLHHHHLLLLLL LLEELLLLHHHHHHHHHHHHEEEELL |
PRMN | - |
PiMo | - |