ENST00000450628.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000450628.1 |
Source |
Gencode19 |
Same with |
lnc-RHOB-6:1,NONHSAT069397 |
Classification |
intergenic |
Length |
754 nt |
Genomic location |
chr2+:19675211..19688611 |
Exon number |
3 |
Exons |
19675211..19675373,19680079..19680186,19688129..19688611 |
Genome context |
|
Sequence |
000001 GGAAGAGAAG ATTAAGACAC AGAGATACCA GAGAGGTCGT TCACAGAGGA AAGACCATGT GAAGACGCAG TGAGAAGGTG 000080
000081 GCCATATTCA AGCTGAGGAG AGAGACCTCA GAAGAAACCA ATACTGCCAA CGCCTTGGTC TTGGACTTCC AGCCTCCAGA 000160 000161 ACTGTCCTGG ATCAGAAGAT GCCTGACAAG AGGCCACTAT CAGCAGCAAC AGCACAGTGG GGACAAACCT GAGACCTTGA 000240 000241 TGGACCGTGG ACACCAGCAG GAGAGACAGA GGAACTTGAA GTCTAAATGG GCAGACAAGA CCAACATACA CAAAGCAGAG 000320 000321 AGTGGCACAA GAGCCATGTC TGATGCAACA GTGACTCAGG AGGATCACTC TGACTCAGAA TGGCCAAGCA AAGGTATTGG 000400 000401 GAGGAAGTGG GATAGAACTG AGCTTTGAAG ACCGTGCTAA AATATTTACA GACTCCCCAG GTTATCTCAA GTTCTCTCCA 000480 000481 GGAATTAGCT TCACCTCTTT GTGCTTTGGC TCCACATCAG TTAAATAGTG GTAACGTTTG ATCGTTAAGA ACCATGTAGA 000560 000561 GATGAAACAA TTTTCAAAGT TTTTTAATTA AGTGTACTCA TTGCCACTCA AAGACAAATA CCATATAAAT ATAATAATAA 000640 000641 TCATATTGAG AAACAAAATA GCAATGATGC AGATACTCAT GTACTGTTTC ATGTTTGTGG TCTTTGAGGG GAGTTTTTAC 000720 000721 TCAAATATCC CTAGATGAAT AAATACATAT GGTC |
Predicted Small Protein
Name | ENST00000450628.1_smProtein_239:427 |
Length | 63 |
Molecular weight | 7222.796 |
Aromaticity | 0.0483870967742 |
Instability index | 41.0016129032 |
Isoelectric point | 8.15875244141 |
Runs | 7 |
Runs residual | 0.0407373271889 |
Runs probability | 0.0261437908497 |
Amino acid sequence | MDRGHQQERQRNLKSKWADKTNIHKAESGTRAMSDATVTQEDHSDSEWPSKGIGRKWDRT EL |
Secondary structure | LLLLHHHHHHHHHHHHHLLLLLLLLLLLLLEELLLLEEELLLLLLLLLLLLLLLLLLLLL LL |
PRMN | - |
PiMo | - |