ENST00000449270.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000449270.1 |
Source |
Gencode19 |
Same with |
lnc-ANKRD5-1:1,NONHSAT078568 |
Classification |
intergenic |
Length |
1036 nt |
Genomic location |
chr20+:9966736..9987764 |
Exon number |
2 |
Exons |
9966736..9967167,9987161..9987764 |
Genome context |
|
Sequence |
000001 GGGACTTTTG AAATGCATTC TGTGAATGAG AAGAAATGCA AACATGTTGG CAAAACTGAT TATTTTCATT GTGGATCTCA 000080
000081 CGCTTGCTTT GGCCATTTTT GTTATCTTTT ATTTAATGGC TGCCACTGTT TTTTTCATCT CGGTCATTTT CTATATTTTC 000160 000161 AAAAGGGAGA TGGAAAAAAA ACTTTGACTT CAACAAGCGC CGAATCTGGG CGCTGGATTC TAGCAATGCT ACTGAGGAGC 000240 000241 CTTTGGCAGG TGGCGCAGAG AAAGTCAGCT CCAAGCTGCT TCCTGTCCAT TGTCCAGCTG TAGGAGAAGG GTCTTTCCTG 000320 000321 CCCAAGGACA GTGGTCCTCT CTTCTAAAGA GCAAGGAGCT CTCTGAGGTG GAGGAGGCTT GTGAAGACTT CCCAGAACAC 000400 000401 TGCACCCACC TGACCAAGAG GTACTTTTTA AGGTCATTCA AACTGTCATC TACACATGAA TAACAATGAA ATTCTCATAA 000480 000481 AGAAGCAGAA ATACCCAGGA GGCATGAAGA GTCATCATGC TTCAAAAGTA CATGTATTAG GACTTCACGA CCTCAGGAAA 000560 000561 AGTAGACTCC GTAACTCTTA AAAGCTCAAT CTTGGAGAGG AGAAACATGC TGTTTGATGA CATAGCACAG AAACTTGTTG 000640 000641 AAATATCCTT GGAGCTTGAG ATGTCGAGAG CGAGCCATCA AAATGTTCTC AAGAATTAAA TTGAAAAATG TTGCTTCAAA 000720 000721 ATGTCTTAGC CAACCAAATA CAAACATTTT TGTCATTGTG ACAAAAAAAA AGCTCACCAA TTGTCTTTGC TAGTCTCAGC 000800 000801 ACAGCCCAAG AGGAGCATCC TTCATGAGCC AACTGAAAAA CAGTGTGTAG TCTATGCTTC TGACCAGATG GGCTTCTCTT 000880 000881 GTCACCATAA CATTATGTAT TAGGACTTCA TGTATTATGT ATTATGTCAA CACTTTATTC ATTATGCTGA TCATACTCTG 000960 000961 TATTTCACTT GCTCTGGTTA TTTGTAAAGC TTTTCCTATT TCATCATTAA ATTATCCTTG TATTTTAGCA ACTGCA |
Predicted Small Protein
Name | ENST00000449270.1_smProtein_455:580 |
Length | 42 |
Molecular weight | 4736.491 |
Aromaticity | 0.0243902439024 |
Instability index | 43.8975609756 |
Isoelectric point | 10.7084350586 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.0438337497161 |
Amino acid sequence | MNNNEILIKKQKYPGGMKSHHASKVHVLGLHDLRKSRLRNS |
Secondary structure | LLLHHHHHHHHLLLLLLLLLLLLLEEEELLLLLHHHHLLLL |
PRMN | - |
PiMo | - |