ENST00000449124.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000449124.1 |
Source |
Gencode19 |
Same with |
lnc-OSR1-3:1,NONHSAT069385 |
Classification |
intergenic |
Length |
626 nt |
Genomic location |
chr2-:19244622..19546509 |
Exon number |
5 |
Exons |
19244622..19244767,19262844..19262928,19265742..19265895,19325013..19325148,19546405..19546509 |
Genome context |
|
Sequence |
000001 TTGCCTAGGC TGGATTGCAG CGGTGCGATC AGGACTCATT GCATCCTCAA CCTCCCCGAC TCAAGCAGTC CTCCCACCTC 000080
000081 AGCCTCCTGA GTAGCAAGGC TACAGAGACC TGGGGGATTT TAGAACAGGG CTTTCAAGGT AATGAAGGAA GAGAATCTTC 000160 000161 TTTGGACTTC TTTTTGCTCC AGATGCGGAG AAGGCAACTT CCCGGAGTCT CTACCAGTGA GAAGGCTACA GAATCATGGG 000240 000241 CCGATGGGGT CTCACTATGT TGCCCAGGCT GGTCTCAAAC TACAGTGGCT CAAACAATCC TTCCAGTACT GCCTCCCGAG 000320 000321 GTGCTGGGAT TATAAGCGTG AGCCACAGCA CCTGGCCACA GAGTACATTT TAAATGTCTT AATAAAACGT GACAGAAAGT 000400 000401 CTAGGTAGAA AGCAGCTATC TTTGATGACA GAATGATAAA GAAACCCACC TTTCTCCCAA CAATCCATAA ACACCCTGAG 000480 000481 GAGATGTCAC CTTCTATGTA ATATCACTTG GATACTGAAA ATTCTCCATG AACTGGAAGA ATGTATGCTT CAGTGTGGTA 000560 000561 AACAGAATTT CTAAAATGAC CTCTTCCTCC CTGAGATATC CTGACATAAT ACCCTAAATT TGTAAA |
Predicted Small Protein
Name | ENST00000449124.1_smProtein_182:334 |
Length | 51 |
Molecular weight | 5367.1424 |
Aromaticity | 0.04 |
Instability index | 78.668 |
Isoelectric point | 6.00933837891 |
Runs | 9 |
Runs residual | 0.0153216374269 |
Runs probability | 0.0371253606547 |
Amino acid sequence | MRRRQLPGVSTSEKATESWADGVSLCCPGWSQTTVAQTILPVLPPEVLGL |
Secondary structure | LLLLLLLLLLLLHHHLHHHLLLEEELLLLLLEEEEEEEEELLLLLLLLLL |
PRMN | - |
PiMo | - |