ENST00000448015.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000448015.1 |
Source |
Gencode19 |
Same with |
lnc-EYA3-1:1 |
Classification |
antisense |
Length |
491 nt |
Genomic location |
chr1-:28265386..28286704 |
Exon number |
5 |
Exons |
28265386..28265590,28282282..28282361,28282520..28282603,28285364..28285451,28286671..28286704 |
Genome context |
|
Sequence |
000001 GGCCGCCGAG CGCATACTGG ACGGCGGCCC ACAGTTCACT CCTCAGGCGC GGAGGAAATG GTGGAAGGCC CAGCTCTGGG 000080
000081 TGATCCTGGG CGCTGCCCCC GTTACCCGTT ACCAGGAAGA AGGACTCCTG ACCTTCAGGC TCAGTGTGGC TCGGTCATAT 000160 000161 TCGAACACCC GGATGGCTGG ATTGTTGGCC CCATTGACCA CTCCAGAGCA TCCGAAAGCT GTCGGTGTGG TGGTGCCCGA 000240 000241 AGAACTGCCC TGCTATGACG CGATGATGCT TCCGGACCAC CTTCAGATGA GGAAACTGAG CGAGTGAGCG GCAGACCGGG 000320 000321 GATGCCGAGC ACGTCAGAAT GGAAATGATC ACAGTGCACT ATATTCTGCC ACCACCTACC AGCATGGCCT TGGAGATATA 000400 000401 TACAGGTTTT CCTTGACTTA CAATGGGGCT ACGTCCCCCA AAATTGAAAA TATCATAAGT CAAAAATGCA TTCAACACAC 000480 000481 CCAACCTACC A |
Predicted Small Protein
Name | ENST00000448015.1_smProtein_338:415 |
Length | 26 |
Molecular weight | 2852.3888 |
Aromaticity | 0.12 |
Instability index | 71.544 |
Isoelectric point | 4.50567626953 |
Runs | 5 |
Runs residual | 0.00830188679245 |
Runs probability | 0.0383854442678 |
Amino acid sequence | MEMITVHYILPPPTSMALEIYTGFP |
Secondary structure | LEEEEEEEELLLLLLHHHHHHLLLL |
PRMN | - |
PiMo | - |