ENST00000447281.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000447281.1

Source

Gencode19

Same with

lnc-RAB9B-1:1

Classification

intergenic

Length

1229 nt

Genomic location

chrX-:103172005..103174131

Exon number

4

Exons

103172005..103172808,103172992..103173043,103173415..103173663,103174008..103174131

Genome context

Sequence
000001 CTTTCCTGTT AAGTGGGCAC ACTACTACCT CCTTCACAGG GCTGCTGAGA AGAAAGGAGA CAGGCGCATC CGCACACAGA 000080
000081 AAGCACTCAG TAAATGCTGT TTCCCCCCTT CCCCCTATAC AAAGAGACTG AAAGCAACCG CGGCTGCCCG GAGGTCCGAA 000160
000161 CTGGAGGGTG GCCGCAGCCG TGACTTCCTT GGGAACCGCG CTGCCTCGAC TCGGCTACCT CTCTGCGAAG CACTCGCTAA 000240
000241 GCCGGGCAGC CCCGGGGTCG CTTAGCGGCC CAGGAGGCGC CAGCGATCCT GTTCCCCTGC AGAGCTATGG GGACCGGAAG 000320
000321 GCGAAACAGA GCTGTCGACG CGGGAGCATA CGCTGCCCAC CAGTGGAGCG CAGGTCATCA AAGCCGAATC CGAATTTGAA 000400
000401 TTCTGTGCGG CTGATTGCAG AGCTGTCTTG AGGCCCTGAG GACTGGGATC TGCGACCCCC AGTGGACAAA AGTCGACTCT 000480
000481 ACCCCAGAGG CTAATTTTCT CAAGGCAGGC ACCTGTTGAG AGGCTGCAAG TAAAATACAG GGGAACGCTA GTTTCCGAGC 000560
000561 TCATGTAAGA ATCTGAGAAA TAACGGGGGT AAACTTTGAC AAAGGGGTGT GTGATTGAGA CCTGAGGTCA TGAGATTAAT 000640
000641 GGGTTCTTAT TACCTCTTGC GGGGGGAGGT AGTAAAGGGG AGGGGCAGGT GGCCTGTGGC GTCCTGAAGA TTTTTCATGC 000720
000721 ATTCTTTTTC CGAGAACTAA ACATTGTCAA CTCTAATATA TCTATAGCGC AACTTGCTTC AAGGACAGTA ATAATTTTCA 000800
000801 TTTAATAATT TTCCATTTAA TCCCTTTACT ACATGGTCAT TTCTGTCTCT TATATTCCTA GGTTTCCCTT TATAAGGATT 000880
000881 AGTCAGATCA ACATTATATC TCTAACAATG TTCCTTAGCT TTTTCACTCT CATTATACCT AGAGAATTTA ATGGAATAAA 000960
000961 CCAGATTTTA TATATATATA TATATATATA TATAAATGTG TGTGTGTGTG CGTGTGTGTG TGTATAAAAT TACTCAACAT 001040
001041 TCAAGTAGTC TTGAAAAAAG ATGGGTAGGA GTCACCTTCT TTCCCTTCAT CAGTTACCAG TGTTCTCTTA ACATAATGGA 001120
001121 AGAGGCAGGA GGTATTCCCA CCTACAACTC AGGATTCCTA TGTCCTATGG GTTCAGTTGT GTCCCCCCCC CCAAAAAAAA 001200
001201 AACACCAAAT ACATCTATTG GACTCCTGA
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Predicted Small Protein

Name ENST00000447281.1_smProtein_995:1228
Length 78
Molecular weight 8622.0725
Aromaticity 0.103896103896
Instability index 49.2662337662
Isoelectric point 8.69232177734
Runs 13
Runs residual 0.0327498588368
Runs probability 0.0494816083051
Amino acid sequence MCVCVRVCVYKITQHSSSLEKRWVGVTFFPFISYQCSLNIMEEAGGIPTYNSGFLCPMGS
VVSPPPKKKHQIHLLDS
Secondary structure LEEEEEEEEEEEEELLLLLLLEEEEEEEEEEEEEEELHHHHHHLLLLLLLLLLEEELLLL
EELLLLLLLEEEEEELL
PRMN -
PiMo -