ENST00000447281.1
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000447281.1 |
Source |
Gencode19 |
Same with |
lnc-RAB9B-1:1 |
Classification |
intergenic |
Length |
1229 nt |
Genomic location |
chrX-:103172005..103174131 |
Exon number |
4 |
Exons |
103172005..103172808,103172992..103173043,103173415..103173663,103174008..103174131 |
Genome context |
|
Sequence |
000001 CTTTCCTGTT AAGTGGGCAC ACTACTACCT CCTTCACAGG GCTGCTGAGA AGAAAGGAGA CAGGCGCATC CGCACACAGA 000080
000081 AAGCACTCAG TAAATGCTGT TTCCCCCCTT CCCCCTATAC AAAGAGACTG AAAGCAACCG CGGCTGCCCG GAGGTCCGAA 000160 000161 CTGGAGGGTG GCCGCAGCCG TGACTTCCTT GGGAACCGCG CTGCCTCGAC TCGGCTACCT CTCTGCGAAG CACTCGCTAA 000240 000241 GCCGGGCAGC CCCGGGGTCG CTTAGCGGCC CAGGAGGCGC CAGCGATCCT GTTCCCCTGC AGAGCTATGG GGACCGGAAG 000320 000321 GCGAAACAGA GCTGTCGACG CGGGAGCATA CGCTGCCCAC CAGTGGAGCG CAGGTCATCA AAGCCGAATC CGAATTTGAA 000400 000401 TTCTGTGCGG CTGATTGCAG AGCTGTCTTG AGGCCCTGAG GACTGGGATC TGCGACCCCC AGTGGACAAA AGTCGACTCT 000480 000481 ACCCCAGAGG CTAATTTTCT CAAGGCAGGC ACCTGTTGAG AGGCTGCAAG TAAAATACAG GGGAACGCTA GTTTCCGAGC 000560 000561 TCATGTAAGA ATCTGAGAAA TAACGGGGGT AAACTTTGAC AAAGGGGTGT GTGATTGAGA CCTGAGGTCA TGAGATTAAT 000640 000641 GGGTTCTTAT TACCTCTTGC GGGGGGAGGT AGTAAAGGGG AGGGGCAGGT GGCCTGTGGC GTCCTGAAGA TTTTTCATGC 000720 000721 ATTCTTTTTC CGAGAACTAA ACATTGTCAA CTCTAATATA TCTATAGCGC AACTTGCTTC AAGGACAGTA ATAATTTTCA 000800 000801 TTTAATAATT TTCCATTTAA TCCCTTTACT ACATGGTCAT TTCTGTCTCT TATATTCCTA GGTTTCCCTT TATAAGGATT 000880 000881 AGTCAGATCA ACATTATATC TCTAACAATG TTCCTTAGCT TTTTCACTCT CATTATACCT AGAGAATTTA ATGGAATAAA 000960 000961 CCAGATTTTA TATATATATA TATATATATA TATAAATGTG TGTGTGTGTG CGTGTGTGTG TGTATAAAAT TACTCAACAT 001040 001041 TCAAGTAGTC TTGAAAAAAG ATGGGTAGGA GTCACCTTCT TTCCCTTCAT CAGTTACCAG TGTTCTCTTA ACATAATGGA 001120 001121 AGAGGCAGGA GGTATTCCCA CCTACAACTC AGGATTCCTA TGTCCTATGG GTTCAGTTGT GTCCCCCCCC CCAAAAAAAA 001200 001201 AACACCAAAT ACATCTATTG GACTCCTGA |
Predicted Small Protein
Name | ENST00000447281.1_smProtein_995:1228 |
Length | 78 |
Molecular weight | 8622.0725 |
Aromaticity | 0.103896103896 |
Instability index | 49.2662337662 |
Isoelectric point | 8.69232177734 |
Runs | 13 |
Runs residual | 0.0327498588368 |
Runs probability | 0.0494816083051 |
Amino acid sequence | MCVCVRVCVYKITQHSSSLEKRWVGVTFFPFISYQCSLNIMEEAGGIPTYNSGFLCPMGS VVSPPPKKKHQIHLLDS |
Secondary structure | LEEEEEEEEEEEEELLLLLLLEEEEEEEEEEEEEEELHHHHHHLLLLLLLLLLEEELLLL EELLLLLLLEEEEEELL |
PRMN | - |
PiMo | - |