ENST00000445174.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000445174.1

Source

Gencode19

Same with

lnc-FN1-3:2

Classification

intergenic

Length

3690 nt

Genomic location

chr2-:216476286..216708259

Exon number

10

Exons

216476286..216478461,216480000..216480357,216485841..216486073,216487409..216487484,216488835..216488958,216605600..216605744,216608537..216608637,216612027..216612117,216614966..216615140,216708049..216708259

Genome context

Sequence
000001 GAATCCAGGA ATTGGAAGGA AAAGAAAACA GTTCTCTATT CATGCTAGTT AACTAATCAA TTCAATATGT ATTAACTGAG 000080
000081 CACGCTACAT GCTAGGCACT CTTCTAAGTG CAGGGGAGAC AGCAGTGAAG AAAGCAGACA AAGTCTCTGA ACTCCTGTGT 000160
000161 CTTCTATTCA AATGGGGAAG ATGAACAATG AACAGATAAC ACAAATAGAA GAATGCGTGA CCTATCCAAT CCTTCCTCTC 000240
000241 ATGGAAACAC CAACTCATCC ATGCCCTCTG TGCTGAAACT TCGTCTCAGC CTGCTGGAAT CACCTGCACC CCATGGGAAC 000320
000321 TGTAGCCATA TCTTCAGTCC TGTGAGCCCC CGTCATGGCC TGTCACAGGA GTAAATGAGG AGTAAGGCCC AGAATACTCA 000400
000401 GTACCTCTCA ATGACCCTCA GACGCTGTAG GAAGAGGATT GGTTCACCTT TTAACCCAGA ATTTCTCACA TTGAATGGAC 000480
000481 AGGATGCATT CCAAGAGGCC AGAGTATGTG CATCTCAGCT CCTGATGGTT TCCACCACCA CCATTACTTT CTCTATGTCA 000560
000561 AGATACCTGG GAAGCCGGAG ACAGGCAGCC CACGCACTGC AGTGATGAAA GGACTCTCCA ACGAGGCAGA CAGGAACCCT 000640
000641 GCAGTTGGGA ATACAGAGCC TTCTCCTATG GGAAGACCAC AGGAAAAAGA AACACCCAAG GGGGAGGCAT GAGTCTTTGT 000720
000721 GAAAGTTGTT TTAAGGCAGA GTATCATATC GCATCAAAAC CGCTCCATAA GTCCTGCCAC TCCACGTGCA ATGCCATGAA 000800
000801 CTTGAAGAAA CTGCTGGTAA GAGAAAGCAA ATGCTGTGAC CAGGCAACTG CTGCAAACCA ATGGGCTTTG GGGAACTGTG 000880
000881 CTTCCCTTCA GAAAGGAAAG AGTATTTAAC GATGAAAAGG AAGGATTGTG TCTTACTTAT ACTTACGGGC TTGTGGTTCA 000960
000961 GCGGAGACCA CACTGGACTG GACTGAACAG ACAACTGAAG GGCTCTCTCT ACCTTTCAGC ATCTCTGTCT GCCTTTCTGA 001040
001041 CTACCTAAAA ATTACTGCAA CCTCTGATTC TGTTTCTAAG GTGGATTTTC CCTACTCATG CTTCCTAGAG ATTTGGTGAG 001120
001121 GATTTGTTGA GTCATGGGAC ATTTCAGCTT GCCAAGGCTC CTTTGCTGGC TGACTTTCTG CTAATTCTGC AGCTGGATGC 001200
001201 AGCAGAAGAG GATGGAAGGC AGAAGGAAGG GAAAAGTGGC TTCCTTCCCG ATTACTGCCA GTCCTGTCAG TGTTGCCCAA 001280
001281 GACTGCCAAT TTGTTCCACC AGCAGCAGTG CCTTCGGACT TCTGCCTCAG TGTTTTCCAG CAGTCCCAGT GAGAGGTGAC 001360
001361 AACGCGCTAG CAGCCCTCAC TTACTCTTGG CGCCTCCTGG GCCTCGGCGT CCACTCTGGC TGCGCTTGAG GAGCCCTTCA 001440
001441 GCCCGCGGCT GCACTGTGGG AGCCCCTCTC TGGGCTGGCT GAGGCCGGAG CCAGCTCCCT CTGCTTGTGG GGAGAAGAAT 001520
001521 CTTGGTCGTC CAGAAAGCTT GCTATAGCTG CCCAGCATTT GCCTCCTCCA CAAAGAAGGA CCAAAAGAAC AAGTAGACAA 001600
001601 TCACATGCCA AATAAAATGT CTAAAGGAGA GCACTGAAGC TCAGCAAAAA CGTTACAAAG ACCCTCTGAG GTGCAGAAAC 001680
001681 TCGGGATGGC AGCACAAAGA GGAAAGCAAA GCAGCCGGTC AGGATCAGCT CACAGTCAAG GGCGCCCCGC CTTGAGTAGG 001760
001761 AAATGTAAGC AGGAGATGCC CTGCAGGCAA CATTCCCACC ACAAATGCCT GCAAGCCTAG CTGTAGGAGA GCCTCGCAGT 001840
001841 GTTGAGCCCA GTGCGGGAGC TGCCTGGAGT CTCTGTGACT ACATTACTCC AGAGAGGCCA CTGGGTCCCT CCTTAGTCCC 001920
001921 TGGGACCCAA GCCGCTGCAG CACAGTATCA TTTTGAGGAC AGAGCCACTG CCAGAATGCT TCCTGTCCTG GGGCCCGGTA 002000
002001 ACCCCTGCAT GTCCTCATCA CTGGAGCCCC AATATCATTC CACAGTTGTA TGAGGAGTAA AAATAACTAT AAATAAAGAT 002080
002081 AACTCAAGAA TTCTATAAGC AAGCATACAC ATGAAATTCA TTTTATAAGA GGAAAGCTAA CTCCATCTCT CTTGAAATAT 002160
002161 GGAATAGGTT CTTGAAGCAA TTCTAAATGC TGATCTGCTG GAATGATGGC TTCATTGCAC AAGAATTCTG CTTAGTTCAT 002240
002241 TGAAGTCTCC TTGAAGAAGT CAGTCTGAGA ATGGGGGAAT TCCGTTGTTG GTCAGAAGAA TTCTTTGGTC ACTATTGGAA 002320
002321 GTGGGTTCAG TTTAGGGTGA CTATTGATCA ACAGGGTTCA TGGGTTTGCT AAAACTCATT TCAGGCAAGC TTTGGAAGTG 002400
002401 CAGTTCGCTT GGTGCTTATG GGGTTAAAAA CAGGAGGAAG AGAATTTCAC ATTATTGGAG GGCCTGAAAG GAAACTGATT 002480
002481 CCCGCAAGAT GCTCAGACAA GATCAAACCC AGCCCCTTTT CTGGTTTGGA ATTTCTCTGG GCTATAAAGG TAGAAGAAAA 002560
002561 GGCCCTGCAT GGGCCCACTC TAAGTGCTTG GAGGTTTTAG ATAATTTTAT TAAATTGTAG AATCTTAAAC AGAACTACAA 002640
002641 GGTTGCTTTT AAAACCAGAT CTCAGATTTC TTTGAGCTAA CAAATGGTAA AATGTATCTT TAGTATTAGA GTGAGATAAA 002720
002721 GGTAGTTATA ACTTTTTTTT TTACTTATTT TATGTTAACG TATGCAACAA AGGGTACAAA TTGTAGGTAC GCAGCTCATT 002800
002801 GAACTTTTAT GTCTGCACAT GCCTATGAAA CCAACACCCA GAGTAAGATG CGGATAATTT TCTGCTCCCC TGAAAATTCC 002880
002881 CTTGTGCCTT TTCCTCATCA GTACCTCCAA AGGTAACCAC TATTTTGATT TCCATTACCA TAGATGAGTT ATACTTGTTT 002960
002961 TTGAAAAGAT TATTTGAAAT GTGTAATATA AATAATAGCG GTTGCTTATC TTACAGAAAT ATCACTGAGA ATTCATTTCT 003040
003041 TCTCTCCTTC ATTTATTCAT TTGTTCAAAA CACTGTCTAG TACCAACATT GTCCACCGGG CGTTGAGAAT ACAATATTGA 003120
003121 AGAAGAGTCA CTGCCTGCCC TCTGGAAAAA TCAGAGTATT TGAAAGAATA CACACAAGTA AACAGGCAGC TATGGCAAAG 003200
003201 TGGGTAAAAG CTGCAAAACA GGGAAGTTTC GCCAAGTGTC AGATGCCAAG AAGTGTCAGA TGCCAAGAAG AAAGGGTGCA 003280
003281 TGACATAGAC TTGGGGGGGT CAGTAGTGGT TTCTGGAACG AGTGACATTT AGACTGAAAC TGGAAGGATA TGAGTAAGGG 003360
003361 CTAATCGGAC CAAGATGAAG AGATACAGAA GCAGAAGGAA CAGTAGGAAC AAATGCTCAG AGGCAAAAGA AAGCTTTGAA 003440
003441 TATTTGAGGA ACTGAAAAGC AAAACAACAA AAAATAGCCA TCCCTTGACT AGACAAGTGA CCTGGGGTCA GATCCTGAAG 003520
003521 GGCTTTGCAG ATCACTTTTC CGCTTGTAGA CTTTGTACTT GACTTTAAGG GCCATGGAGA GCCACTGAAG CATTTTCAGC 003600
003601 AAGGGACTGT CATCAGCAGA TTGGTATTTG TTTTGAAGTA GCACATGTAA GAGAAAATAA CAATATGGAC AAATAAAGAG 003680
003681 TTTGAAAAAC
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Predicted Small Protein

Name ENST00000445174.1_smProtein_374:604
Length 77
Molecular weight 8672.9228
Aromaticity 0.0789473684211
Instability index 66.1118421053
Isoelectric point 11.206237793
Runs 13
Runs residual 0.0296430732002
Runs probability 0.0464038699333
Amino acid sequence MRSKAQNTQYLSMTLRRCRKRIGSPFNPEFLTLNGQDAFQEARVCASQLLMVSTTTITFS
MSRYLGSRRQAAHALQ
Secondary structure LLLLLLLLHHHHHHHHHHHHHHLLLLLHHHLLLLLHHHHHHHHHHHHHHHEELLEEEEEE
HHHHLLLHHHHHHHLL
PRMN -
PiMo -