ENST00000444238.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000444238.2

Source

Gencode19

Same with

NONHSAT005123

Classification

intergenic

Length

736 nt

Genomic location

chr1+:110955615..110964501

Exon number

5

Exons

110955615..110955716,110956774..110956853,110958631..110958810,110960869..110960997,110964257..110964501

Genome context

Sequence
000001 TAAGTTTTGT TAAATTTGAG TAAGAAGACC TGTTTGTTTC CTCAAGTTGC TTATAATCTA GGTGAGGACA CATCTGAGAG 000080
000081 AATAACTAAT AGTTCAGTGA AGTTAAAAAC AACAACAACA ACAACAAAAA CACAAAACCC TGAGGCTCAG AAGATAAATA 000160
000161 TTTGCTGAAG ATCACTGTGC TTATTAGATG GGTGTTACTG ATTCTTACCT CAGAGAAGAG AATGTCATGG AGACAAAATG 000240
000241 ACCTGCTTAG AGTTCTGCAC CCCCCAGCAT GGAGAGCAGA GCGCAAAGAT TTCTTCCGGA CTCCCACATT CCCCTTGGAA 000320
000321 TCCAAGAACT GGTCTACTGT CACAACACTT TAGTACCCTC TTCTCCCAAG GAGGCAGCAG AAACTGGGGT AATCACAACG 000400
000401 GTCAACAGCA GCAAAGGCAG CACTTTCTGA TTTACTTGAC TGCTATGGAT GCCACCTCTC TCCACGCCTC AGTTTAATAT 000480
000481 CTGTAAGTTT GGGCAGTACT GCTGTCAGTG AATCAGCTTT ATCTGTGCAG TGGGCAAGAA GGACCCACTG GGTGACTACA 000560
000561 ATATGGCACT TTGGTATGTT GGTTATTTTA AGTTAGAGGC CTTTGATGCT GGAAGAAGCT TTACTCTGAT ATCTCCTTAT 000640
000641 CTACCACAAG ACTGGATCTG CCAAAGAGAA CACAATTGCG TTCCATTCCC TTCCTGAAAT CTCATTATCT ATGGCAGAAA 000720
000721 AGAAGACTGG GGAATG
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Predicted Small Protein

Name ENST00000444238.2_smProtein_221:352
Length 44
Molecular weight 5229.93
Aromaticity 0.139534883721
Instability index 42.9209302326
Isoelectric point 10.7805786133
Runs 7
Runs residual 0.0054873268879
Runs probability 0.0399348928761
Amino acid sequence MSWRQNDLLRVLHPPAWRAERKDFFRTPTFPLESKNWSTVTTL
Secondary structure LLLLLLHHHHHLLLLHHHHHHHHLLLLLLLLLLLLLLEEELLL
PRMN -
PiMo -