ENST00000444238.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000444238.2 |
Source |
Gencode19 |
Same with |
NONHSAT005123 |
Classification |
intergenic |
Length |
736 nt |
Genomic location |
chr1+:110955615..110964501 |
Exon number |
5 |
Exons |
110955615..110955716,110956774..110956853,110958631..110958810,110960869..110960997,110964257..110964501 |
Genome context |
|
Sequence |
000001 TAAGTTTTGT TAAATTTGAG TAAGAAGACC TGTTTGTTTC CTCAAGTTGC TTATAATCTA GGTGAGGACA CATCTGAGAG 000080
000081 AATAACTAAT AGTTCAGTGA AGTTAAAAAC AACAACAACA ACAACAAAAA CACAAAACCC TGAGGCTCAG AAGATAAATA 000160 000161 TTTGCTGAAG ATCACTGTGC TTATTAGATG GGTGTTACTG ATTCTTACCT CAGAGAAGAG AATGTCATGG AGACAAAATG 000240 000241 ACCTGCTTAG AGTTCTGCAC CCCCCAGCAT GGAGAGCAGA GCGCAAAGAT TTCTTCCGGA CTCCCACATT CCCCTTGGAA 000320 000321 TCCAAGAACT GGTCTACTGT CACAACACTT TAGTACCCTC TTCTCCCAAG GAGGCAGCAG AAACTGGGGT AATCACAACG 000400 000401 GTCAACAGCA GCAAAGGCAG CACTTTCTGA TTTACTTGAC TGCTATGGAT GCCACCTCTC TCCACGCCTC AGTTTAATAT 000480 000481 CTGTAAGTTT GGGCAGTACT GCTGTCAGTG AATCAGCTTT ATCTGTGCAG TGGGCAAGAA GGACCCACTG GGTGACTACA 000560 000561 ATATGGCACT TTGGTATGTT GGTTATTTTA AGTTAGAGGC CTTTGATGCT GGAAGAAGCT TTACTCTGAT ATCTCCTTAT 000640 000641 CTACCACAAG ACTGGATCTG CCAAAGAGAA CACAATTGCG TTCCATTCCC TTCCTGAAAT CTCATTATCT ATGGCAGAAA 000720 000721 AGAAGACTGG GGAATG |
Predicted Small Protein
Name | ENST00000444238.2_smProtein_221:352 |
Length | 44 |
Molecular weight | 5229.93 |
Aromaticity | 0.139534883721 |
Instability index | 42.9209302326 |
Isoelectric point | 10.7805786133 |
Runs | 7 |
Runs residual | 0.0054873268879 |
Runs probability | 0.0399348928761 |
Amino acid sequence | MSWRQNDLLRVLHPPAWRAERKDFFRTPTFPLESKNWSTVTTL |
Secondary structure | LLLLLLHHHHHLLLLHHHHHHHHLLLLLLLLLLLLLLEEELLL |
PRMN | - |
PiMo | - |