ENST00000444210.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000444210.2

Source

Gencode19

Same with

lnc-FSCN1-2:1,NONHSAT118918

Classification

antisense

Length

3251 nt

Genomic location

chr7+:5515435..5519442

Exon number

2

Exons

5515435..5516661,5517419..5519442

Genome context

Sequence
000001 CTAAATCAAG TCCATTTTAT TTGAAATTTT CCACATGCCA CACATGTACA TGAAAATTCC CATCCAGAAT GTAGTTTGCT 000080
000081 ACAGTGAACA CCAATGTCAG GAGCAGGCAT CACCGTGAGA CGCCACGGGG GCAGGTCAGC GGGACGGGGA CAGGGAGGTT 000160
000161 GGTCATCGAA AGGCAGGTGA TGCATGTCGT GTCATTTAGC ACCTGGTCAT GAGATACGGC GAGACCCCCA GGTCCAGGGA 000240
000241 AAGGTCTCCC CTTAAAACCA CGTGGAGCTC TGCTGTCTCT GGGCAGTCTC ACGTGGACAG ACAATGCTCA GAAGGTGGCG 000320
000321 AAGGGGCTGG AGGGAGATAC CACCGACGGC TGCAGGGGAG GGGCACGCAC ACACACAGGC ACGCACATGC TTGCCCATGA 000400
000401 ACACCCCCCG GGCACACACA CACCCTTGCA CACTCCCCAC CCTCCCTCCA CCCCAGACAC ATCAGCACAG CGGTCCAGGC 000480
000481 TCTGGCTCAC TCCCCGGGAG GCTTCTGTGG CCAGGGTTCC CATGGCGGGT CTGGTGGCAA CAGCTTGGAG AAAAGCCTCC 000560
000561 CGGGACCAAC CCTCATTCCC AGGTCCACTG ATCTGGGGTA GGAGTAGCCA AGTGTTCTGA CAGGCGGTTT TCCCGTAAAC 000640
000641 CGACCCCTTC AGCGTTTCTG CTTTTTGTTG TTTGTTTTCT GAGACAGGGT ATTGCTCCGT GGCCCAGAGT GGAGGGCAAT 000720
000721 GGTGCGATCT TGGCTCACTG CAACATCCAA CTCCTGGGCT CAAGCAATCC TCCTGCCTCA GCCTCCTGAG TAGCTGGGAC 000800
000801 CACAGGCACA TGTACAATGC CCAGCTAACT TTTTTTTTTA TTTTATGTAG CGATACAGTC TCACTATGTT GCCCAGGCTG 000880
000881 GTCTCGAACT CCTGGGCTCA AGCGATCCTC CTGCCCCAGC CTCCCAAAGT GCTGGGATGA CAGGCGTGAA CCACCACGCC 000960
000961 CGGCCCCTCC CATGTTTCTC AAAGGAGCTT TAGAGAGCAG AGGAGCCCGA GTCACTGCCA CCACTGGGTT CCTCAGTGTC 001040
001041 TGTGGGGTTT GTGTTCATCA TGCCCAGTAG ATCTAGAAAC TTCTTTTGTT TTTTTTTTTT TTGAGACGGA GTCTCACTCT 001120
001121 GTCGCCCAGG CTGGAATGCA GTGGTGCGAT CTCAGCTCAC TGCAAGCTCC GCCTCCCAGG TTCATGCCAT TCTCCTGCCT 001200
001201 CAGCCTCCTG AGTGGCTGGG ACCACAGCGC TGCCTGCTGG GGGATCAAGG TCCCCGCATC CAGGCCTCCA GCACCCTCCA 001280
001281 TCCCTGCAGG AGCACTGCTG GCACCGCCAA GGCCGGAGCA CTGGTCTGGA GCTTCATTGG CCGGCAGGGG CCCAGCCCTC 001360
001361 AGCTGTTGGA GCCCTACGGC TCTAGGTCTG GCCCCTCCAC AAGCCCTCCA GGCCCACGCC TGAGCCCAGC CCCGGTCCCC 001440
001441 TGGGTCCAAC GGCCTGTGGC TCTGGGTCCG GACCCAGGGT GTGGTTGAGG GAGGGCGCTG CTGAGCTGGC AGGCAACCCT 001520
001521 TGTGTGTTTG CAGCGCAAGA GGAGCTCAGC CCGTCCTGGC TGCCGTCCTG GGTCGAAGCA GCAAGTGTCT TCCCGCCCTG 001600
001601 TGCACAGACA GGTCCCAGGA GGGCCTCTTG GAGAAGAAAC CGCTCAGGCC CATGTCCTGG CAGGGCCTCT GGGGGCAGCA 001680
001681 GATGGCAAGG ATAGAGCCCG CCCCCTCTGC TGCAGAAGGA AGCGGCCCTC ACCCAGCCCC CCTGGGCTGG ACGGGCCGTT 001760
001761 GAAAACAAGA AAAGCCTTCC ATAGCAGAAA GGAGTACTCA AGGCCCAGAA AGGCAGCTTT GCTCTGGGTC ATCAGGCTCA 001840
001841 AGTGCCTGCT CTGGGCCACC TTCGGAAGCC TGGTGGAGCC GAGTGTTGCC TGGTGACGTG GAGCAGGAGG CGGGGCGGAG 001920
001921 GCTGCGGGAC ACGGGGCTGC AGGGCCGGGA AGGGGGTCAG GAGAATAAAT AGCAGCTAGG TGTGGGGTGA GCTGGGAGCA 002000
002001 CAGGCAGGAG GGGGCAGCCA GAGAGGTTGG GGCTCTCCCT TTTAAAGAAC AAAGGGATAC ATACCCTTTC CCCTCCTCCC 002080
002081 TCCCTCCAAC CCCACAGTCT CTCCCTCACA TACACACACG GAAGACGTGA CTCACACACA CATGCACACA CAGGGCACAG 002160
002161 GTACACGAAG GCACACGTGC ACACACAGGG CACAGGTACA CGCAGGCACA TGTACACACA GGCACACGTG CACGCAGGCA 002240
002241 CACGCATGCA GGCACATGTG CACACACAGG GCACAGGTAC CCGCAGGCAC ACGTGCACGC AGGCACACGC ACGCAGGCAC 002320
002321 GGGGACAAGT GCTGACCACG CTCCTCCAGC AGGCAGCATA TGGTCTGCTG CTTAACAGCC GAGCTCTGCC AATTGGGGAC 002400
002401 CATTAGGGTG GGTTCTTTTC CCAGCATCAA ATGCTGCAGA ATATAAATTG CAACTAACGC TGGTGCCAAA ATAGCACTTA 002480
002481 GAGAAAATAA GCACGTTATT AACATCTGGT GAAGCCCATC TCGGGGGTAG CAGCAGCGGA AATTCTTGCT CTAAGTCAGA 002560
002561 GGATGGTTGC AGGGGACACT AAAAATACAA GGTCCACTGT TTCAGGGGTG CTTTCCAAGG CACTGCACCC CAGCCTCAGG 002640
002641 AACAGCCCTT CCCCCAGTCC TGTCTATGAG TATAAATTAT GCTGCTGGTT AAAACCGCTT GCTCATGAGA ACAGGACACC 002720
002721 CAGGCGCGAT CGTACACACG CTAGGATGCA TTCCTGGAGC AGACGCAATT CTCTAGCCCG AGTGGGGAAT GTTCTGGAGG 002800
002801 AAGGAGTGGG GCGGAGCTGC GGTGCCCAGA GACACAGGCC CCCTGAGGGT CCGGGAACCT CCCAGGCCAC TCGCCCCTGC 002880
002881 CTGGTCGGAG AGCAAGAAGT GGTCAGTCCC AGGAGGCACC ACACCACCCG ATCTGATCGC CGCGCCTGGT GGTCTCCAGG 002960
002961 TGCCATTTTA AAGCTCTAAA GAAATGCCCA GGAACTGTGG GTGGGGGGGG TGCTCCCACC ACCTCTGAGA CCCTCATCTA 003040
003041 CAGCCCCTGC CCCCTGGGGC CGTGGGCAGC TGGTCCTGCG GCCTGCAGAC TAGGAGACGG GGCCTAGGGG TGTGGCTCTC 003120
003121 ACAGGCCATG ACAGGAGGGC CAGGAGGCCT CTGGGAGGCG AAGGCTTGGT CTGGTGTGGG TCCCACCATC GGGCACTGCT 003200
003201 GGAATCAGCC TGCAGAAGGG TCCCTCTGGC CAGGAGGCAA AGGTTCTGCA C
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Predicted Small Protein

Name ENST00000444210.2_smProtein_809:1069
Length 87
Molecular weight 9459.9434
Aromaticity 0.093023255814
Instability index 58.0523255814
Isoelectric point 9.02911376953
Runs 11
Runs residual 0.0117146824019
Runs probability 0.0440574264104
Amino acid sequence MYNAQLTFFFILCSDTVSLCCPGWSRTPGLKRSSCPSLPKCWDDRREPPRPAPPMFLKGA
LESRGARVTATTGFLSVCGVCVHHAQ
Secondary structure LLLEEEEEEEEEELLLEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHH
HHLLLLEEEEELLEEEEEEEEEEELL
PRMN -
PiMo -