ENST00000443719.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000443719.1 |
Source |
Gencode19 |
Same with |
lnc-MRP63-2:1,NONHSAT032356 |
Classification |
intergenic |
Length |
405 nt |
Genomic location |
chr13+:21808707..21809343 |
Exon number |
2 |
Exons |
21808707..21808792,21809025..21809343 |
Genome context |
|
Sequence |
000001 CCGTTTGTGA GAGAAAACCT GGTATCTGGC TTCTGACGTT TCAGTACAAT CTTCTATTGT GCATCTGGAT GACATCACTG 000080
000081 TTGTGTCCTT TGCAGAGATG TGCATACAGG GCCCTAACTG TCCAGGAGCT GCTACGGACA GAGCCCGGTA ATCCCGACGA 000160 000161 CTTAGTGGAT CCTGTGCCTC CCAAGGGTGG CGCCCACGGT GACTGCACAC TTGTCACAGA CTGGCAGGCC ATTTGTCTGC 000240 000241 TGCAGCCCAC CAAATCCCAC AGATCCTTTT GGATCCTTTG CAGCAGGCTT TTCATACCTT GAGTCTTACT TAATGTTCAC 000320 000321 ATGAAAAAGC AACTGCTGTT TGCTGTGCTC ATAAAAGTCT TGTTAGAAAT TAACACCTTG TGTGAATAAA AACATCAAGT 000400 000401 AAGTA |
Predicted Small Protein
Name | ENST00000443719.1_smProtein_68:301 |
Length | 78 |
Molecular weight | 8604.9615 |
Aromaticity | 0.0649350649351 |
Instability index | 46.787012987 |
Isoelectric point | 6.68621826172 |
Runs | 10 |
Runs residual | 0.00621118012422 |
Runs probability | 0.0387475711006 |
Amino acid sequence | MTSLLCPLQRCAYRALTVQELLRTEPGNPDDLVDPVPPKGGAHGDCTLVTDWQAICLLQP TKSHRSFWILCSRLFIP |
Secondary structure | LLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLEEEELLHHHHHEELL LLLLLLLLHHHHHLLLL |
PRMN | - |
PiMo | - |