ENST00000443630.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000443630.1 |
Source |
Gencode19 |
Same with |
lnc-AGTPBP1-2:3,NONHSAT132805 |
Classification |
intergenic |
Length |
492 nt |
Genomic location |
chr9-:88400916..88406449 |
Exon number |
4 |
Exons |
88400916..88401090,88401353..88401466,88402799..88402953,88406402..88406449 |
Genome context |
|
Sequence |
000001 ATCTGTCTTA GAGCTATTGG AATCCTGGAT CATTGTGGGA AATGAAAAGA ACTGGTTTTT AGCAAGGAGA CCAAGAAACT 000080
000081 CTACTCCCTA GGGGCTAGCA ATGAGAGAAA GGAAGCCTTG AGTCTTTGAG CACAGGGTGA CAGTTTGGGT CCTATGTGAG 000160 000161 ATGATCAAAT CCACAGCAAC AGAGGAAAGG ACAAAAGGAA AAGATACTTC GATGGAATCA GCAGCCATTG ATCCAATGCC 000240 000241 AACTCCAAGA CTGGAACGTC GCAATGATAG TTCCAAGGCG GAAATTTGAC GTAATTCTTT TCGACACAGT TTTACAGGTC 000320 000321 TGGATGCCCA TTTTAATTCT TCTGAAAGCA TGCCTCCTTC TGGCTTCAGG ACTCCATCTC CAGCCTTATG ATCTAAAAAT 000400 000401 AATCCCCAAA CCAAAAAATT AGATATTATT TCCTCAAAAT TAGGTGTTTT AATCAAAACA TCTTAACATA AATACATTAT 000480 000481 TATCACCCAA TA |
Predicted Small Protein
Name | ENST00000443630.1_smProtein_263:421 |
Length | 53 |
Molecular weight | 6026.4438 |
Aromaticity | 0.0769230769231 |
Instability index | 72.0134615385 |
Isoelectric point | 9.74493408203 |
Runs | 4 |
Runs residual | 0.0734463276836 |
Runs probability | 0.0450671259494 |
Amino acid sequence | MIVPRRKFDVILFDTVLQVWMPILILLKACLLLASGLHLQPYDLKIIPKPKN |
Secondary structure | LLLLLLLLLEEEHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiii |