ENST00000439943.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000439943.1

Source

Gencode19

Same with

lnc-GDAP1L1-1:1

Classification

intergenic

Length

1441 nt

Genomic location

chr20+:42839600..42854667

Exon number

3

Exons

42839600..42839717,42843528..42843643,42853461..42854667

Genome context

Sequence
000001 CTCAGAAGCA CGTGCGCCTT ACGTAATTTC CTGTTATTCT TCGGTTTGCC TCCTCCCAGT GGCGTGGATT TGCTCCCGAC 000080
000081 CCGCTTTTGG GGCGTGCCTG CTTCCTCCTC TCTGTTAGAT CTCGCTCTGT CACCCAGGCT GGAGTGAAAT GGCACAATCT 000160
000161 TGGCTCACTG TAACCTCCGC CCCCAGGTTC GACTGATTCT CGTGCCTCAG CCTCCTCAGT AGCTGGGATT ACAGATGAGC 000240
000241 CCCAGAGAGG CGAAGCCACT TGAGCTCGTG AGTGACAGTC AGATGTCAAG CCCTGCTCTT TCTAAAGCGT GCTGCCTTCA 000320
000321 GAAAAGAAGA GCCAGAAGGA TGGAAATTAC TTCAGAAAGA TGAATACCAG CTTTGAAGGA ATAAAAGCTG ACGAGGAATT 000400
000401 GAAGGAGTTG AGGCACGAGC TTGAACAGGG TTGCATGTTT GGCCCTTGAT TGTAAATGCC CATTGCTGCA CCTGTTCCTG 000480
000481 TTACTTGGGG AGTTGCAGCA GAAGGAACAG CGGCCTGGGA CTCCAGAGAA CTGGGTTCCC TCTCATCCCT CCAGGGCCAC 000560
000561 CACTTCTTGT GGGCCCTTGG GCAAGTCACT GTACTTTCTG AGTCTCAGTT TCCCCATTTG CAGAATGGAA ATAACTACCC 000640
000641 CGGTCTACCA ACTTAGAAGA ATTGCTTTGA GGATCTGATA AGGTGGTGTG GATGATGCTG CCTTGGGGGC TTTACAGTAT 000720
000721 GGAGCTCAAG GGACCCCTTA AGTTGGGCTT ACTTAGTAAC TCCAGGGGTG GGCAGAACAG GACTCCAATG AGGGTTTTTT 000800
000801 TCTTTTTCCC TTTTTTTTCT TTTCCTATCT CTTAACTTTT ATCTTTATTA TTTTACAATG CCCTTGTAAG ATGAAACAAG 000880
000881 TGATGCTGAA ATATCTTTTT CTTTTTTAAC CTTTATTTTA GAATTGGGGT ACATGTGCAG GTTTGTTACA TAGGTACAGT 000960
000961 GTGGGCTGCT GAGGTTTGGG AGTACGAATG AATTAGTCAC CCCAGTGGTG AGCATAGTGC CCGATAAGTG GTTTTTTCAA 001040
001041 CCCTTACTCC CATCCCTCTC CATTCTTGTG TTCCCCAGTG TCTGCTGTTC CCATTTTTAT GACCATGTGT ACTCAATGTT 001120
001121 TAGCTCCCAC TTAGAAGTAA GAACATGCCC AGCACTTTGG GAGGCCGAGG TGGGTGGATC ATGAGGTCAA GAGATCGAGA 001200
001201 CCATCTTGGC TAACAAAGTG AAACCCTGTC TCTACTAAAA ACATAAAAAA TTGGCCGGGT GTGGTGGTGG GCACCTGTAG 001280
001281 TCCTAGCTAC TCGGGAGGCT GAGACAGGAG AATCGCCTGA ACCGGGGAGG TGGAGGTTGC AGTGAGCTGA GATTGTACCA 001360
001361 CTGCACTCCA GCCTGGGTGA CAGAGTGAGA CTCCATCTCA AAAAAATAAA AATAAAAAAA TAAAAAGAAT GTGGTGTATG 001440
001441 A
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Predicted Small Protein

Name ENST00000439943.1_smProtein_455:655
Length 67
Molecular weight 7010.7678
Aromaticity 0.0909090909091
Instability index 49.4560606061
Isoelectric point 5.25042724609
Runs 9
Runs residual 0.0142442387951
Runs probability 0.0249367014073
Amino acid sequence MPIAAPVPVTWGVAAEGTAAWDSRELGSLSSLQGHHFLWALGQVTVLSESQFPHLQNGNN
YPGLPT
Secondary structure LLLLLLLLLLLLLLLLLEEELLHHHHLLHHHHHHHHHHHHHLLEEEEELLLLLLLLLLLL
LLLLLL
PRMN -
PiMo -