ENST00000439382.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000439382.1

Source

Gencode19

Same with

lnc-RABL2A-1:1,NONHSAT073825

Classification

intergenic

Length

607 nt

Genomic location

chr2+:114426743..114430768

Exon number

4

Exons

114426743..114426778,114429415..114429503,114430157..114430315,114430446..114430768

Genome context

Sequence
000001 CTCGGCTCAG CTGCGGACGG GATCTGCTGG AGCTGGGTCA CACCTGGGGC CCTCCGTGAG CCTGGTCTGG TACGGAAGAA 000080
000081 ATTCCCCCTA CTGTTCTAGA ACTCATCTGG TGTCAAGTGT GTCAGTGACG GGGCACTGAG ACTGATGCAA AGGAGAAAGG 000160
000161 CAAGGAGAGA AATGATTTGC ATCTTAGACT GGTGCAAATT CACACTTTGT GGAAAATTAA CAGGTTCCTC ACAAGACACC 000240
000241 CTCCCCAGCC ACCGTGAAAC CAGATGCTCC TTAGCCTCCC CAGGGATGTG TCTTACATGT GCCAACAGTG AGCCTGGGCT 000320
000321 GCCTCTCACC CTGAGTCTGT GTTGCTGTGG AGGCACCACT CTGCAGCCTT CTTCCTCTCT GCAAGCAGGC TGCTACCCAC 000400
000401 ACTGGCTTGG ACCTCTGCCC CAGTCAAGGG GGGCAGAGCT ATGACACTAG TCTCAGAGTT TCAACAATGC CTGTTGGAAA 000480
000481 GGAAAACCCA CCTATTTATT GTATCCTTTC TAACTCACTT AGGAAGGATG CACAACATCT TAAATATCAC TGGAGATAAG 000560
000561 AAGTCAACTC TGACATGAGT CTGCACAAAT AAACCTTATG GAAATAA
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Predicted Small Protein

Name ENST00000439382.1_smProtein_440:577
Length 46
Molecular weight 5216.1103
Aromaticity 0.0666666666667
Instability index 56.4422222222
Isoelectric point 9.18658447266
Runs 6
Runs residual 0.0289141414141
Runs probability 0.0494023435201
Amino acid sequence MTLVSEFQQCLLERKTHLFIVSFLTHLGRMHNILNITGDKKSTLT
Secondary structure LLHHHHHHHHHHHLLLLEEHHHHHHHHHHHHHHHLLLLLLLLLLL
PRMN -
PiMo -