ENST00000439186.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000439186.1 |
Source |
Gencode19 |
Same with |
lnc-PRKACB-1:1,NONHSAT004168 |
Classification |
intergenic |
Length |
683 nt |
Genomic location |
chr1+:84255963..84267148 |
Exon number |
3 |
Exons |
84255963..84256125,84266377..84266469,84266722..84267148 |
Genome context |
|
Sequence |
000001 GGCCTGCCAA AGTGCTGGGA TTACAGGCGT GAGCCACCGC ACCCGGCCTA TGTAAAAGCC TTTTATAGTT TAGAGCGCAC 000080
000081 TTTCAGACCT ATTATCTTAT TTGATTCCCG TGGCAACTTA ATAAGGTAGA AAGAGAGTAA GCATCATCAT CTACATTTTA 000160 000161 CAGTTACAGG GATCACCTGT GTATTTGCTG GTGGCTGTCT AATAAAAGAT GTGGGTGTGG AGGAAATAGA TTTTTAATCA 000240 000241 TCTGAATGTT ATAGAGTTTC TTCTTAGGTA TGAAGAGAAT CTATTATCTT GATTAGATAT AAATTCAAAA CAAATGTTGA 000320 000321 ATACCGGCTG TTGTATTCTC AACATTTTAG AATTCAACTT TAAATGAAAT CTTCAAAAAA GCAAGTCCAA GAAAAACCTC 000400 000401 ATAGTAATAT TTGTGTCTCA TTCACTACCA TCACCAAATG ATATTGATTG CAGTACCTGA AGAAATCATT AGGCACCATA 000480 000481 TGACACTGAT GTCTATTTAG AGTGTTTTTT ATTCTGTATT GGAAAATAAA GCACATTACC TAAATGATTC AAATGGCAAG 000560 000561 AAAAAAATTT ATCCCTAAAA GCCATCTGTG AATTAGCATA TGGGCTTCTG GAACCCAACA TCTTGATTCT ATATGTGAGT 000640 000641 CAGGAGGAAA AAAAACAACA AAAAAAGAAT GAAAGGAAGA AAA |
Predicted Small Protein
Name | ENST00000439186.1_smProtein_437:499 |
Length | 21 |
Molecular weight | 2347.9041 |
Aromaticity | 0.0 |
Instability index | 93.54 |
Isoelectric point | 5.96221923828 |
Runs | 5 |
Runs residual | 0.01 |
Runs probability | 0.0245186362834 |
Amino acid sequence | MILIAVPEEIIRHHMTLMSI |
Secondary structure | LEEELLHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |