ENST00000439104.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000439104.1

Source

Gencode19

Same with

lnc-APOC3-2:1,NONHSAT024352

Classification

intergenic

Length

419 nt

Genomic location

chr11+:116644105..116644921

Exon number

2

Exons

116644105..116644227,116644626..116644921

Genome context

Sequence
000001 CTCGGGCAAG TTATCACAAA ACAGGGAGAA TCCCGGCACC TAACTCGGAA CGGTCACAGG CTGAGATGAT ATTACTGTGT 000080
000081 GAAGTGCGCA GAGCGGTGTT GGGCACATGG TCATCGGAAC TATATAAGAA CTGAAGCGTG GCAAGATTAA GGAAGTTGCT 000160
000161 CAACTTCACA TAGTCAGAAC ATGACTCTAG GGAGTAGAGG CTAGCGAAGT GGGGTGCAAG AGGTCATCCA AATTTCTTGA 000240
000241 AATACCAGAT CTTTTTACCT CATCATATAT GTTAGATTGT CAGTTTTATC GTTTTCTTCC CAGCTTTATT ATTTGACAAA 000320
000321 AAATTATATA TATTCAAGGT GTACAATGTG ATGACTGGAT ATAATTATAC ATTGTGTAAT GATTACCAAA ATCAAATTAA 000400
000401 GTAAAACATC CTTCACTAA
[back to top]

Predicted Small Protein

Name ENST00000439104.1_smProtein_65:133
Length 23
Molecular weight 2582.0493
Aromaticity 0.0909090909091
Instability index 51.1545454545
Isoelectric point 7.95440673828
Runs 6
Runs residual 0.0363636363636
Runs probability 0.0372284048754
Amino acid sequence MILLCEVRRAVLGTWSSELYKN
Secondary structure LEEHHHHHHHHHLLHHHHHHLL
PRMN -
PiMo -