ENST00000439104.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000439104.1 |
Source |
Gencode19 |
Same with |
lnc-APOC3-2:1,NONHSAT024352 |
Classification |
intergenic |
Length |
419 nt |
Genomic location |
chr11+:116644105..116644921 |
Exon number |
2 |
Exons |
116644105..116644227,116644626..116644921 |
Genome context |
|
Sequence |
000001 CTCGGGCAAG TTATCACAAA ACAGGGAGAA TCCCGGCACC TAACTCGGAA CGGTCACAGG CTGAGATGAT ATTACTGTGT 000080
000081 GAAGTGCGCA GAGCGGTGTT GGGCACATGG TCATCGGAAC TATATAAGAA CTGAAGCGTG GCAAGATTAA GGAAGTTGCT 000160 000161 CAACTTCACA TAGTCAGAAC ATGACTCTAG GGAGTAGAGG CTAGCGAAGT GGGGTGCAAG AGGTCATCCA AATTTCTTGA 000240 000241 AATACCAGAT CTTTTTACCT CATCATATAT GTTAGATTGT CAGTTTTATC GTTTTCTTCC CAGCTTTATT ATTTGACAAA 000320 000321 AAATTATATA TATTCAAGGT GTACAATGTG ATGACTGGAT ATAATTATAC ATTGTGTAAT GATTACCAAA ATCAAATTAA 000400 000401 GTAAAACATC CTTCACTAA |
Predicted Small Protein
Name | ENST00000439104.1_smProtein_65:133 |
Length | 23 |
Molecular weight | 2582.0493 |
Aromaticity | 0.0909090909091 |
Instability index | 51.1545454545 |
Isoelectric point | 7.95440673828 |
Runs | 6 |
Runs residual | 0.0363636363636 |
Runs probability | 0.0372284048754 |
Amino acid sequence | MILLCEVRRAVLGTWSSELYKN |
Secondary structure | LEEHHHHHHHHHLLHHHHHHLL |
PRMN | - |
PiMo | - |