ENST00000438699.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000438699.2 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
1031 nt |
Genomic location |
chr9-:66523532..66532438 |
Exon number |
4 |
Exons |
66523532..66524057,66525014..66525128,66529191..66529515,66532374..66532438 |
Genome context |
|
Sequence |
000001 AAAAAAAAAA CCTTAAATGC CCATCGCTAA GTGAAAGAAG CCGATCTGAA AAGACTACAT ACTGTTATCA GCCTTTTGCC 000080
000081 AAGCTGAACA CAAGGGGATG AAAAGAAAAT CTGGGCTCGA ATGTGCAATT TCATATTTTC TGTTAAGGCA ATTTACAACA 000160 000161 TATCATAAAG CTGCATTAAT AAACAGATGT TCCACAGTCT GCAGAATATA AAATAAATGT CTTGAATAAG CTACGAAGAC 000240 000241 CAAGGCACTT TTCGGAGCAG ATTTTTTTGT CTTAAAGTTT TATCTCATGC AAACACTGCG TATAACACAA ACTTATATAA 000320 000321 TCAATGCTTT TAGCAAAATG TCATAGTAGA ACCAAGGCCC AGTTGTTAGC TGAAATCTAT ATAAATATAG GCAGGAGTAG 000400 000401 GGCTGATTGG AGCCATTGTA CAGTGTCGGG AACATACCAG GACACTGAGA ATAGTGTCAT GTCATAAGGA CCCAGAGCAG 000480 000481 ATGGACCCTG CTGTGATGCA CAAAGAGGAC CACGCAAGAT ATGATAAAGA TCTACATCAC TGAATTTTGG TTCCATTTTT 000560 000561 GTATCTCAGC TTCCAGGAAA TAAAAAAGAA TTCTAACATT CATACTTTCA GTATTTTATG TGAGAGGTTT TGTTGTCAAA 000640 000641 ATCAAGTCTG AGAGCAATGT TTGTTGGGGC CTTTAATTGG AGTCACCAAG CGATAAAGGG GACATTGTCC TCAACAATAA 000720 000721 CCCTATAATA AACACGTTTT GGACAATAAA TATATGACAA TTTCTTAAAA GCAATTTCTT GGGCAATCAA GACAGTATGG 000800 000801 CTTGAGTATG GAGTTATACG ATGGTTTGGA TTAATCCAGT ATTAAATCTT TGGTTATTAC AGAAATCAAT GGAGCCTATT 000880 000881 CTTCCAAATA ATCCTTAAAT ATTACTTATC TCAACTGAGA TTTTGGTGAA AATTTAGCTT TAGAGCTTTT ATTGACCTGC 000960 000961 CAATGACCTG AAGTTAAGAT TATTCTTTTC TACTGAATGA AGACAAACTA CCTTATAAAA ATTAACCCAG A |
Predicted Small Protein
Name | ENST00000438699.2_smProtein_323:466 |
Length | 48 |
Molecular weight | 5286.9549 |
Aromaticity | 0.063829787234 |
Instability index | 65.385106383 |
Isoelectric point | 7.83636474609 |
Runs | 7 |
Runs residual | 0.0173404255319 |
Runs probability | 0.033386327504 |
Amino acid sequence | MLLAKCHSRTKAQLLAEIYINIGRSRADWSHCTVSGTYQDTENSVMS |
Secondary structure | LLLLLLLLHHHHHHHHHHHHHHLLLLLLLLLLEELEEEELLLLLLLL |
PRMN | - |
PiMo | - |