ENST00000438597.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000438597.1 |
Source |
Gencode19 |
Same with |
lnc-RD3-2:1,NONHSAT009272 |
Classification |
intronic(S) |
Length |
626 nt |
Genomic location |
chr1-:211305930..211306716 |
Exon number |
2 |
Exons |
211305930..211306368,211306530..211306716 |
Genome context |
|
Sequence |
000001 TCCATCCCTG CAACTGAAAA GTCCGAGGTG TCGGGACGTG CTCTCGGCGG CCTGATTCCA CCCCTTCACC CACCCACCAC 000080
000081 TTTCTAGGTG AAGTTAAGGC TCACCTTCGA AGTGAGGGGC AGATGGTTTT CCTGGCGTCA GGTGGGAAGT GGAGGGCACA 000160 000161 GGTGCAGAGC GAACTAAATG GTCACAGATC GACGGTAGCA TGAAGCCTTG AGAGGCGAGA GTCCTAGGAG CGGGGATGGA 000240 000241 AAGGAAGAAT TCCAAACGCC TTTCGGACTT AACAGAGGAG AGACCCCAAC TAAGCACTTG CAGAGCGACT AGGAGTCCTG 000320 000321 GCAGTTGGAA GGCGCAGCGC ACGAGTTCAT CAAATGGCTA TATTGAAAGA TAGCCAAGCA TAAGATGCTC TTTGCAGACT 000400 000401 CCTAGAGCCC CCACCCCACC CCTTCCAGAA ACAGATGACA TTCTTCTACC AGGGAGACAT GAGGAGCTAA CTTAGGAAAT 000480 000481 GGGTTTTAAT AATGTGTAAA TATCACGATT TCAGAGTCTA AGGAGCTTCT GTGTAAAATG ATGAGCTTCT GTTTGGATTT 000560 000561 AGTTAGGGAT TCAGGGGAAG GGCATGAAAA GTGACTTATG CTACTAATAA ACACTCTTTA ATTAAA |
Predicted Small Protein
Name | ENST00000438597.1_smProtein_122:202 |
Length | 27 |
Molecular weight | 2830.1846 |
Aromaticity | 0.0769230769231 |
Instability index | 43.6230769231 |
Isoelectric point | 10.8344116211 |
Runs | 6 |
Runs residual | 0.0214669051878 |
Runs probability | 0.0426455867632 |
Amino acid sequence | MVFLASGGKWRAQVQSELNGHRSTVA |
Secondary structure | LEEEELLLEEEHHHHHHHLLLLLLLL |
PRMN | - |
PiMo | - |