ENST00000436697.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000436697.2 |
Source |
Gencode19 |
Same with |
lnc-CCPG1-1:3,NONHSAT043987 |
Classification |
antisense |
Length |
866 nt |
Genomic location |
chr15-:55609382..55611243 |
Exon number |
2 |
Exons |
55609382..55610065,55611062..55611243 |
Genome context |
|
Sequence |
000001 GGCTTGGCGG TCTCTGTGCT CGGGGGTCCG AAAACTGCTG GAAGGCCCCC GGTCTCTGGA GGGGAGCAGG CGGTAGCGAG 000080
000081 TTTAGTGACG TGGAGCAGGC GCAGAACAGT CGGAGGTACC TGAGTGGTTA TTAAAAACGG TAACGGTAAT TGTAGACGTC 000160 000161 AGTGTTGGTG TTAACATTTC AGATTTGAAG AGATTTCCTG GGTGTGGAGT GTGACTTTCC AAAACCAGCT TTTCCTTGAG 000240 000241 CTGTATTTGT TGCAGCAATG TTTAGGAGAT TGACTTTTGC ACAACTGCTT TTTGCCACTG TCCTTGGAAT TGCTGGAGGA 000320 000321 GTATATATTT TTCAACCAGT ATTTGAACAG TATGCCAAAG ATCAGAAGGA ATTAAAAGAA AAGATGCAGT TGGTACAAGA 000400 000401 ATCAGAAGAG AAGAAAAGTT AATACTACAT GGAGTTAGGC CTGGCGCAGT GGCTCACGCC TGTAATCCCA GCACTTTGGG 000480 000481 AGGCCGAGGC GGGTGGATCA GGTGGTCAGG AGTTCAAGAC CAGCCTGACC AACATGGTGA AACCCTGTCT CTACTGAAAA 000560 000561 TACAAAAATC AGCCAGGCTT GGTGGCATGC GCCTGTAATC CCAGCTACTT GGGAGGCTGA GGCAGGAGCA TCACTTGAAC 000640 000641 CTGGGAGGCA GAGGTGGCAG TGAGTCAAGA TCACGCTGCT GCACTCCAGC CTGGGTGACA GAGCGAGACT CCATCTAAAA 000720 000721 AAACAAAAAG CAAAAAAACC CACAAATACC TCATGGAGAT GAACTGTAAT AATTGCTTAA AGTTCCATTT AATTATGTTA 000800 000801 ACTCTAATCT AGCAAAAACA TAGATGTACT TAAAAATAAA TCATGGATAA TGATTTTTTA ACCTAA |
Predicted Small Protein
Name | ENST00000436697.2_smProtein_257:421 |
Length | 55 |
Molecular weight | 6313.3024 |
Aromaticity | 0.12962962963 |
Instability index | 55.5185185185 |
Isoelectric point | 8.03546142578 |
Runs | 7 |
Runs residual | 0.0330623306233 |
Runs probability | 0.00416382769323 |
Amino acid sequence | MFRRLTFAQLLFATVLGIAGGVYIFQPVFEQYAKDQKELKEKMQLVQESEEKKS |
Secondary structure | LHHHHHHHHHHHHHHHHHLLLEEEELHHHHHHHHHHHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |