ENST00000436529.2

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000436529.2

Source

Gencode19

Same with

NONHSAT081642

Classification

intergenic

Length

806 nt

Genomic location

chr21+:30743268..30746029

Exon number

3

Exons

30743268..30743476,30744755..30744883,30745562..30746029

Genome context

Sequence
000001 AAATAAAAGG ATTTGACTTT GGGCTGACAA TTTAGCATTT AACCACTGTC TCCGCACCAG TTCCACAAGA GCAGGGATTT 000080
000081 AGATTAATTG GAAAAACCTC ATTGGTTTCT GATGGAGGGG GCATTCATAG AAACAACCTA CTGACAACTA AGGAGCTACT 000160
000161 GCGATGGGAT GGGCAGCCTG CAGCTTCACT CGGTGGGCAG CCTCCACAGG TATCGTATCT GATTTCAGAT ACATATGATG 000240
000241 GTCTCAAGTG TGTTTTTTAC CACCACCACT TTGTAGGCCT GTTGATGCCA CTGCTGTTGA AGTCTATGTG AATGGTGCCC 000320
000321 CCTGGTGGAA GGAAAAAGAG AATGGGACGC CAGGAATGTC AGATGCTTTT CAGCCTCTCC CCTGCTCTCA CGCCTAGAAA 000400
000401 CAAGAGCTCC ACAAAGGTCT CTCATTCCTC AAGGCTGATG AAAAGCCCAG CAGCTAAATG GCCAGAAGCC TGTCTTTGTG 000480
000481 AGAAAGCAAG AAGTCTCTCG GTTTGAACTC TTCGGTCTAG AGACAGATTC TTCTACCAGT GGTGTAAAAC CCTAAAGAGG 000560
000561 CTCTGCATAA GACCTACCAC TGCTCTGTGT CTCATGACAC CCTGCCCCCA CCACTGGAAG GCCACACTTA TTCTTTGTGT 000640
000641 TCATGCTTCT CTATGATCTG CAAGTTTCCC AAGAACACCT GGATTCGAAG CTCAAGTCCA CCGCTAAATA GCTATGTGAC 000720
000721 CTAATGTGTC AGATGGTTAT AAGGATTACA GAGAAAGAGG TATAGATAGA GCTGGTAGCA GTGACAGACA CATCTTTACA 000800
000801 TCATAT
[back to top]

Predicted Small Protein

Name ENST00000436529.2_smProtein_311:505
Length 65
Molecular weight 7073.3283
Aromaticity 0.03125
Instability index 85.9484375
Isoelectric point 10.6791381836
Runs 7
Runs residual 0.03921875
Runs probability 0.0326671209024
Amino acid sequence MVPPGGRKKRMGRQECQMLFSLSPALTPRNKSSTKVSHSSRLMKSPAAKWPEACLCEKAR
SLSV
Secondary structure LLLLLLLLLLLLHHHHHHHHLLLLLLLLLLLLLLEEELLLLLLLLLLLLLLHHHHHHHHH
HLLL
PRMN -
PiMo -