ENST00000436506.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000436506.1 |
Source |
Gencode19 |
Same with |
lnc-TANK-1:3 |
Classification |
intergenic |
Length |
765 nt |
Genomic location |
chr2+:162101266..162103965 |
Exon number |
3 |
Exons |
162101266..162101406,162101935..162101978,162103386..162103965 |
Genome context |
|
Sequence |
000001 TTTCTAGCCT CCGCCTCCAG GCGGGTGAGG AGGTGACACC TGAGAATTCC TCCCTCTCAC CCCTGACCCT GCCGGAAAGC 000080
000081 GAAACTGAGA TGCGGGCATT GGGCCCTGGG AAGCGTGGGG AAGGGGAAAG GAGAAAGCCA GGTTAACTAC GTCAGGATTA 000160 000161 ATGTGTTCCA CTTCTGCTGC CTGAGAAAAT GGAGAAATTA AGTCCTTTCC ATGGATCATT CCTTCTGTAA ACAGAGATCA 000240 000241 CAAAGCAAGA GCTTCAGCAT CCTCGTGAAA AAGACATTTT GTTCTGGGTG TCATCATCTC CTTCCACTAC AGCTTGCAAT 000320 000321 TGGAACAAGC TTCACATCCT GGGGGTGCTG CCTATCTCTG TCTTGATTTC TGTCTGTCTA TTCCTCCCAT TGACAGGAAT 000400 000401 GTCGTTTGTA TCCTCCACGC AGCAGTTTGC AGAAATCCAG CAAGGTTTAT GGTTTATGTT GCCCAGCATG TATAAACACA 000480 000481 ACGCTCTCAA ATGCTTTTTA AAAATCTATG AATTTGTTAG ATGTCTTCAC ATCCTGGTCC TCCTACCCCA ATTCTCAAAC 000560 000561 ACAAAGTACT CTGTTGCCCT ATTATAGTCC TGCGATAGTT CTGGCTAGGA TTAGGTTGAC GGTCTAAGCC CCAAGAAAGG 000640 000641 CCTGGCATTT TCATAGCAGG CTTTCCCCAG TGCTTTGAGT CTTCCTCTCT CACTCCCTTT TTCTTTTTCC CTCGGAGGAG 000720 000721 GGGGTGTTGG GGGTGGGAGG TGATTAGTAA ATGTTTCAGG TAATC |
Predicted Small Protein
Name | ENST00000436506.1_smProtein_398:586 |
Length | 63 |
Molecular weight | 7303.6539 |
Aromaticity | 0.161290322581 |
Instability index | 56.1935483871 |
Isoelectric point | 9.13946533203 |
Runs | 7 |
Runs residual | 0.0407373271889 |
Runs probability | 0.0258157316981 |
Amino acid sequence | MSFVSSTQQFAEIQQGLWFMLPSMYKHNALKCFLKIYEFVRCLHILVLLPQFSNTKYSVA LL |
Secondary structure | LLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLEELE EL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLL LL |
PiMo | ooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiii ii |