ENST00000435649.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000435649.2 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
828 nt |
Genomic location |
chr1-:91248543..91317072 |
Exon number |
4 |
Exons |
91248543..91248980,91254955..91255044,91297487..91297753,91317040..91317072 |
Genome context |
|
Sequence |
000001 CCCCCTGGAG GCGGCAGCGC CCGTTTATTT GAGGCTTCTA ATGTGAGGAA AAACACGGAA TGACAAGTGT GGGAAAGAGC 000080
000081 AAGCACTAAA TTACTGTCAG AAAAATAAAC GGAGTAGCAC AGTGCTGCTC GGTGATTTAC GGGGGCAATT AGTCACCACC 000160 000161 CCACGGCGCT GCTGAGGACA GCACGGCAGC AGACAAGTCA GGCCCATGAG GAAGAAGAGG CTTTGCACTG CTCTCCAGAC 000240 000241 AACTTTTCAA ACAACAAGAG AGGATATTTG AGCACATTAG GTTTTGTGTC TTCATTCTGG CCGTGTGAAG ATGTGCCTGC 000320 000321 TTCGCCTTCC ATCATGACTG AAGTTTCCTG AGGCCTCCCC AGCTATGCTC CCTATACAGC CTGCAGAACG GTCGGCTGCC 000400 000401 TCCAATCCTG AGGTCATCAC TCATCAAGAG GGGATAATCC CAGGGACAGC AGGATCTGCT TCGTTACTTG GATTTAGGAG 000480 000481 CCAGAAACCC ATCAGGCAAC TAAACAGTAA CAATGACCCG CCATTAAACA CACTGAGAGA AGAGCATGAT GAAGAGTTTG 000560 000561 TACAAGAAGA AGCCAGGAGC ACTTGCTGAC AATGCTTACA GAGACGCAGG CTTCTATGAG CTCTGCCTGT TGAACTGCAG 000640 000641 TAAAAATAGA TCTCCTTCCC CAGAGAGGCT TGGATGTGGG CACAATATCA GTTCAGACGA TGGTCAATGC ATGTACTTAA 000720 000721 TAGAGTGAAA AGACTTTGGA CTGTGAAGTC AGATTACCTG GGTCTGAATT GTTATTCTTC TACTTCTTTG TAGTATGCTT 000800 000801 TCACCACATT AAAAATTGTC TGAGCCTC |
Predicted Small Protein
Name | ENST00000435649.2_smProtein_545:727 |
Length | 61 |
Molecular weight | 6704.6265 |
Aromaticity | 0.0833333333333 |
Instability index | 67.3585 |
Isoelectric point | 7.64630126953 |
Runs | 11 |
Runs residual | 0.0335992907801 |
Runs probability | 0.0461209872976 |
Amino acid sequence | MMKSLYKKKPGALADNAYRDAGFYELCLLNCSKNRSPSPERLGCGHNISSDDGQCMYLIE |
Secondary structure | LLHHHHLLLLLHHHHHHHHLLLLEEEEELLLLLLLLLLLLLLLLLLEELLLLLEEEEEEL |
PRMN | - |
PiMo | - |