ENST00000434218.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000434218.1

Source

Gencode19

Same with

lnc-SERHL2-1:4,NONHSAT087056

Classification

intergenic

Length

596 nt

Genomic location

chr22+:42897602..42898659

Exon number

3

Exons

42897602..42897780,42897925..42898038,42898357..42898659

Genome context

Sequence
000001 GGAATGAAAG ACCCGGCTGT GTCTTTCAGG TCTGATCTCA GAGCTGAAGC TGGCTGTGCC CTGGGGCCAC ATCGCAGCCA 000080
000081 AAGCCTGGGG CTCCCTGCAG GGCCCTCCAG TTCTCTGCCT GCACGGCTGG CTGGACAATG CCAGCTCCTT CGACAGACTC 000160
000161 ATCCCTCTTC TCCCGCAAGA CTTTTATTAC GTTGCCATGG ATTTCGGAGG TCATGGGCTC TCGTCCCATT ACAGCCCAGG 000240
000241 TGTCCCATAT TACCTCCAGA CTTTTGTGAG TGAGATCCGA AGAGTTGTGG CAGCCTTGAA ATGGAATCGA TTCTCCATTC 000320
000321 TGGGCCACAG CTTCGGTGAG TACAGTGGCC AGGAGCTGAC CGGGCCCGGA GTAGGGCTGG GAGGGAAGGA TAGGAGCTGC 000400
000401 TGCCCCACCC CTTTCCCCTG CACTTATGAG ATCTGCAAAG AGAGATGAGA GGGTCAGTCA GAGGTTGACC ACTGTACCCT 000480
000481 CTGACCTCAG GCAACTGCCG CAAGGGACAC AGGGATGAGG GAAATGTGGT CTTTTGAGTG GTCAGGTCTG ATGAAGGGGA 000560
000561 CATCATGGCC CAGATGCTGA GCCCCCAGCC ACCCAT
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Predicted Small Protein

Name ENST00000434218.1_smProtein_137:268
Length 44
Molecular weight 4760.4927
Aromaticity 0.0697674418605
Instability index 79.9209302326
Isoelectric point 10.7366333008
Runs 8
Runs residual 0.0287431408414
Runs probability 0.0235492845787
Amino acid sequence MPAPSTDSSLFSRKTFITLPWISEVMGSRPITAQVSHITSRLL
Secondary structure LLLLLLLLLLLLLLEEEELLHHHHLLLLLLEEEEEEHHHLLLL
PRMN -
PiMo -