ENST00000434097.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000434097.2

Source

Gencode19

Same with

,

Classification

antisense

Length

2028 nt

Genomic location

chr10+:79542624..79552934

Exon number

2

Exons

79542624..79543087,79551371..79552934

Genome context

Sequence
000001 AAGAGACTGA GTCAGTTCCC ACTTGTGAAT AGACAGCATG AAGGCTTTAA ACCTCTCTGA ACCTGATCAG CATTGGCAAT 000080
000081 GATCTTCTGC AGATCCAACA ACAGCACAGA AGAATGTATC ATCAGGAACA CATTTGGATA TTGACACAAC TTCATCTGCA 000160
000161 GTTGGCTTGT CATCCTGAGC TCCGTTCCCA GGCAGCGTAG ATATTGCACA GGATTTTGCT GACCAGGGAG TTGGGTTATA 000240
000241 AGTGGTAACT CCAACCTCTT AATACTAACG ACATTGACAG TACCATATAA TCCATCTATT ACACCACACA GGAAAATCAA 000320
000321 GCCCAGTGGT ACAGGACAGA AGAACTGGCT CCAGCCAGGA TCAAGCATTG CTTTGGCATT GTTCCCCAAT ACCTGGGCCT 000400
000401 TTCTTCTCCA ATTGTTGGGG TAACTGGAGT GAGGAGCCTG AGGGGACCCA AAGGTGTTCT CCTGAGCCTA AGGAGGACCC 000480
000481 AATGGCAGGC ATCAGCACAG CTGAACACCA CCTGGACCCC ACTGCAGCCC TGCCCACGCA GCTCTCACGG AGCAGACACA 000560
000561 GTCCTCAAGT AATAAGCACA GATGGAGGAG AAACGAGAGG CTGTGGAAGG CAGGAGAGAA AGGCCGAGAG ACGAGTTTGT 000640
000641 AAGAATGCCA AAGTCACCTT CCCCATTGTG GGAGGAAAAT GCCAAAGGCA CTGGTTCTGC TGCCACAGGC AGTCTGAGCA 000720
000721 CCTGGAGTTG TGACGTCCTT CCAGGAGAGG TGCCACCAAG GAGCAGGAGG TTTGTCAAAG CTCTGGTCCC ACCAACAAGA 000800
000801 ACCTCCCAAA GCAAAGCAGC CCCCATTGAG GTTCCAAGGT CGTTTTGCTG AAGACGGGAA CGAAACCAAC ACCAAAGCGA 000880
000881 CAGGGGGTTG ACAGAGGGGA CAGGGGCTGG GCACCGGCAA CATGGAGCCG TTCAAGTAAA CATAAACCAC CAAATACTTA 000960
000961 GAAAAGGCTT GTAAACGAGT GATCCGAAAG GTTCTCTTTG CAGCATCTCT GATCAGCTGG CTAAAGAAAG GTGGGTGCTG 001040
001041 AACCCGTCTT TAGTGTTATC TGTTTTGTGT TAAAGCACAC GTGTGACACG GGCAGAGTGT GTGGGCCTGG GCCTGGATCG 001120
001121 CACGCAGCCG TGGCCCTCTG TCTACAAAGG AGGTGCTTCT GGGTCCTGGT TCCGGATCCT TCCCCCGCAT GTTCATAGAC 001200
001201 GGACAGACTT CTACTTTCAG TCGCTAGAAA AGAGCTGAGT CTGGTGTCCC CTCAGGCGGC CAGCTGCAGT CATCCACAGC 001280
001281 ACAGCATTCT CCTAGAGCGG GCAGGCTGGA ATCCACAGGA CTTTATTTTG TTCTTGATTG ACCATTGCCA AGATCTGAGT 001360
001361 GCAAATGCTT GACAGGGCTC CTCCCTGGAT GACCCCTGCA AAAGAGCCCC CCAGACACGT CATTCAGCTC AGAGTAAGAC 001440
001441 CCCAGGTTTG AGGCAAGGCA GTACAGCTTG CACTCTTTCT ACTGTGTGGC TGTCTGCTTT GTGCTCCTTG GCACTCTGCT 001520
001521 CCATCCCCAC CTGACTCTCC TTCACCAGCA AGAAACTGGG AAAGAAAATT GCCCCTCTTG AGTTGATCAC TCATATGTAA 001600
001601 ACTGCCCACC CCACTGCAGT TAACACCCTG GGTTGGGTTT GCAATGGTTG GGGGAATCCC AGGGCATCAG AAGGAAGTTT 001680
001681 GGAGGACATG TGGCGGTGGT CTAATCATTA GCAGGATTCT GCAGGAAACG ACAAGTTTAA GGAGCCAGAT AGCTCATGGC 001760
001761 CAAGAGGAGA GTCACAGAAA GATGATGGCG CCAACTTGGG CCAGCCCTGT ACTATAGGAG TTTGACAAAG GGGTCTATAG 001840
001841 ACACCAGGCC AGGGGTACTC CAGTGTGCTC CACATAACAG CACCTGGACA CAAACCAAGC CCCTACTGCA ACAAGGCATG 001920
001921 CTCAGAAATT GACAGTGAGT GTCTAGAAAC TGCTATGGAA ACAGGACGTC GTAATTTTAT GTCTGTTGAA TCTAACAAGA 002000
002001 AAAAAATAGA GCTTACCTTT TGCAAGAC
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Predicted Small Protein

Name ENST00000434097.2_smProtein_581:850
Length 90
Molecular weight 9910.1516
Aromaticity 0.0561797752809
Instability index 91.3831460674
Isoelectric point 9.58001708984
Runs 13
Runs residual 0.00286406697511
Runs probability 0.0380878616173
Amino acid sequence MEEKREAVEGRRERPRDEFVRMPKSPSPLWEENAKGTGSAATGSLSTWSCDVLPGEVPPR
SRRFVKALVPPTRTSQSKAAPIEVPRSFC
Secondary structure LHHHHHHHHLLLLLLHHHEEELLLLLLLHHHHLLLLLLLLLLLLLLEEEELLLLLLLLLL
LHHHHEEELLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -