ENST00000433315.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000433315.1 |
Source |
Gencode19 |
Same with |
lnc-RP11-111K18.1.1-2:1,NONHSAT120274 |
Classification |
intergenic |
Length |
561 nt |
Genomic location |
chr7-:42869271..42884037 |
Exon number |
2 |
Exons |
42869271..42869689,42883896..42884037 |
Genome context |
|
Sequence |
000001 AGGAATCTAC CTTTAAAGAA CAGAGTGGAT GACTCTGATG CAGGTTGAAC TGGACCCCAT AAAGGGGCAC CACTGCCATT 000080
000081 TGTTGCTCTG AGGTGCAACC TACAGACCTG CAGACCCTGG AGCAAAAGTT CATCTTGCAG AGGCCTCCAG TTCCTCCTGT 000160 000161 GTGTCAGGAA CAATTCCGGG GATTCAGCTG TGAACACGAG TCAACGATCT TCCCCATGTC AAGCTTATCT TCCAGTGGAG 000240 000241 AAGAAGAGGA GTGATCACAC TTAATAGGAA AAACAAGCAG GAAATAAAAG CAAAAACACA AATCCAGGTG GGCTTTGTCA 000320 000321 TTGCTGAGAC TACTCCTGAT AAATCCTGAC ATTTCAGGGT ACTGTGCAGG AGACTTACAG ACACCAGAAA CCCGAAGGCA 000400 000401 GCATTCACCT GGATAATGCT AGAAGGAAAC ATAAAAGGTC AGAGAAGGCC CCGACCATAT GTACATCTTA CGGACCACTG 000480 000481 ATGATGCTTC AAGATTGCTG GTCAGGTGAA GGAAACACCA TGACCACCCC AAATCAATCA CATAGAATTC CATGACTGAG 000560 000561 G |
Predicted Small Protein
Name | ENST00000433315.1_smProtein_458:508 |
Length | 17 |
Molecular weight | 1923.2408 |
Aromaticity | 0.0625 |
Instability index | 60.2875 |
Isoelectric point | 8.49383544922 |
Runs | 5 |
Runs residual | 0.0104166666667 |
Runs probability | 0.0144497438615 |
Amino acid sequence | MYILRTTDDASRLLVR |
Secondary structure | LEEEELLLHHHHHHLL |
PRMN | - |
PiMo | - |