ENST00000433001.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000433001.1 |
Source |
Gencode19 |
Same with |
lnc-PRR15L-5:2,NONHSAT054347 |
Classification |
antisense |
Length |
912 nt |
Genomic location |
chr17-:45976997..46018756 |
Exon number |
3 |
Exons |
45976997..45977744,45995818..45995937,46018713..46018756 |
Genome context |
|
Sequence |
000001 AGAGACAAGG AAATGCTGTC ACCGCGGTTA ACACGCACGT GGAGGGAAGA CCTGGGTTTT AGTCCTGTCT CCATCAACCT 000080
000081 CAAGAAATGG GACCTCATGG AAGGGAGGGG AGGCAATGCC GAGGATGTGC TCCTGAGCAG GTGCCACAAT TCTTCACCTG 000160 000161 TAAGGCTGAT CTAAGAAGAT TCCTAATTAT CAATTGAGAG CAGAGATATT CCACTTCCAA TTACATGGCC TGCCTGCTCA 000240 000241 CTCTTACTTC CTATTCACAC TCTCTTGGAG ACCACTTTGT GATTCTACCA AATTCTATAG GAGAGGTGAC AACCCCAAAG 000320 000321 AGAAGGCTCT AGAAAGATGA CATTTGGAAA TGTGTACGCT AGTGTCTGCT GGCTCCTCCT GAGCCATTTT TACTCTGTGA 000400 000401 ATGAGATCAA AGGCCACCTA ACTGCCTAAA TCACCACAAA GGGACAAACT GGTATCTCAG AGCACTCAGC AACAAAAACA 000480 000481 AGAAAGCTAA GCCTCTGCAC TGCAATGTGG CAGGGCTTCT GGCTAAGTAT AGCAAGCAAT TCTGATGTGG AGACAAACAG 000560 000561 CAGCAATGGG AATGATATGC CAATGAAGGA TTCCAACAGT TGGGTCTGCA AGTGTGCTTG TCCTGTGACA CAAACGGCCT 000640 000641 AGACATCTCA GCACTGCTTG GAGCTGCTCA TTGGGGGAGC CTAAGAAACA TCAGCCCTTT CACAACCTCT TGCTCCTGAG 000720 000721 CAGAGCTCAT CTCCCAAGAG CACATCAGCC CGCAGCCCAG TCTGATGAGA AGCACAGTAT TCCCCTGTGC CAGTGGCAGC 000800 000801 CTCAGAGCAT CCTGAAAGAG CGCTTCCTAG ACACGCAGTG GAAGCCATGA CTTCCCCTAA GCTGCCGGTG CTGCCTCTGA 000880 000881 ACTCATGTGG AGGTTCTTTT TTCAGTGTCC CC |
Predicted Small Protein
Name | ENST00000433001.1_smProtein_86:196 |
Length | 37 |
Molecular weight | 4132.779 |
Aromaticity | 0.0833333333333 |
Instability index | 48.6805555556 |
Isoelectric point | 9.21173095703 |
Runs | 6 |
Runs residual | 0.0137917637918 |
Runs probability | 0.00301772360595 |
Amino acid sequence | MGPHGREGRQCRGCAPEQVPQFFTCKADLRRFLIIN |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLEEELLLHHHEEEEL |
PRMN | - |
PiMo | - |