ENST00000432653.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000432653.1

Source

Gencode19

Same with

lnc-CPT2-4:1,NONHSAT003306

Classification

intronic(AS)

Length

470 nt

Genomic location

chr1+:53733607..53734273

Exon number

2

Exons

53733607..53733686,53733884..53734273

Genome context

Sequence
000001 TGCCAGCCAC CAGTCCCTGT CACTGTGCAT CTTTGCCAAG CTAATGTGCT CCCTGGAGGA TGGGACCAGC ACAGAGTCAG 000080
000081 TAATGACACT TCACCTCCCT GAAGGCAGGA GCCAGGTTAA AGGGGCATGT TGGAGTGATC TTAAATGACA GCTGTGACTG 000160
000161 TGACAGGAAC CCCCTGTGTT TATGATTTGA GATTTTATGT AACTGCACTT GAAATATTCA TGTGTGTGGA TTTTGTATAT 000240
000241 GCATGGGTAG TTGCATGTTG TCTCCAGTGC ATGTACATAA TCTGTGTCAT GTATTACATG TGTTCTATAT GGGGGCAAGA 000320
000321 ACAGGTTACA CGTTATATGT GATATACTAA TGTATGAGTT ACATATTGTA CAGTTTGGGT GTTACAGTTT TTGGGTTTAT 000400
000401 GGGCTACATG TCAGTATTAT GGCTGCTGTA TTGTTATAAT TTATCTGTTG TATATTGTAT TTAACTTGCA
[back to top]

Predicted Small Protein

Name ENST00000432653.1_smProtein_353:463
Length 37
Molecular weight 4213.0712
Aromaticity 0.25
Instability index 54.8833333333
Isoelectric point 5.26922607422
Runs 7
Runs residual 0.013986013986
Runs probability 0.0261059378707
Amino acid sequence MSYILYSLGVTVFGFMGYMSVLWLLYCYNLSVVYCI
Secondary structure LEEEEEELLEEHHHHHHHHHHHHHHHHHLLLEEEEE
PRMN LLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLL
PiMo oooooooooooTTTTTTTTTTTTTTTTTTTTTTTii