ENST00000432429.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000432429.1

Source

Gencode19

Same with

lnc-CAMTA1-1:2,NONHSAT000679

Classification

intergenic

Length

1686 nt

Genomic location

chr1+:6784697..6787468

Exon number

2

Exons

6784697..6784910,6785997..6787468

Genome context

Sequence
000001 AGGGCTGTTG TTTTTGCCTG TCATGGAGTT CCGTTCATTC TGAACATGTC ACCGGGGACT TTGGAATGTG TATCCATAAC 000080
000081 TCCCTGATTT TCAACCACAT TCCAGCCTGC CTGACTCATG AAGCGTGGAG CGACCCAGGA ACATCCCAGC TCCTCATGTC 000160
000161 CCACATTCTT CAGGCTTTCT CTTAGTTTTG GCATGTGCAT GTAAATGTCA ACAGCTGCTT CTGCTGACTC CTCGTCTCAA 000240
000241 TTAATCGCGG CTCTGTCTTC CGTTTGCTGA AGCCGAAGAC CTCCCCGCTC TCTCAGAGCC CATGTCTGGC ACATCAGCGA 000320
000321 ATCTCGTTGG CACTGCCGTC AAACACATCC ATCTAGGATC TCCCCGCACT TCACGCCACC CACCGCGCTA GTCTGTGGAT 000400
000401 CCCTGTTTCT CTCTTGGATG TAGTAATAGT CACATAGCTG GACTTCTGCC CTGGCACTTC TTCAGCCCCT TGTTAGAGGA 000480
000481 ATCCTGCTAA ATGTTGGATG ATTTACCCCC CACCTCCCGC ACCCCCCGCC ACACACACAT AGGAGCTCCA CTGGCTCCTC 000560
000561 ATAACTCTCA GGGTGCCAGC CTGTCTCTGC CATGACCCGA AAGCTCTCCG TCATCTGTCT CCCGCCCCTC CCTCACTGAC 000640
000641 TCTATCTGCC ACCCTCTCCC TGTTGTCCAC GCTGCCCCAG CCCCACAGGC CTCCTCCTGT TCCTCAGACT CCCCAGGGAT 000720
000721 ACTCCTGCCT CAGGGCCTTT GCCCTGGCTA TTCCCTCCAG CTACAATGCT CTTCCTGAAT CTGCATGATT CGATGCCCAC 000800
000801 TCCCCCATTC TCAGCCTGTC CCCACATCTC AGTGAGCCCT GCCCGGGCCA CCCTGGAAAA TCTCAGCATC CCAGGCTGGG 000880
000881 CGTGGTGGCT CATGCCTGTA ATCTCAGCAC CTTGGGAGGC CAAGGCAGGC AGATTGCTTG AGCTCAGGAG TTTGAGACCA 000960
000961 GCCTGGCCAA CATGGCGAAA CCCCATCTCT CCTAAAAATA CAAAAATTAG CTGAGTGTGG TGGTGCGTGC CTGTAATCAC 001040
001041 AGCTACTTGG GAGGCTGAGG CAGCAGAATC GATTGAACCT GGGAGGCAGA GGTTTCAGTG AGCCGAGATC ATGCCACTGC 001120
001121 ACTCCAGCCT GGGCGACAGA GCGAGACTCC ATCTAACACA CACAAAAAAA GCACTTTTTT TTCATCCTCC CAGCACTTCT 001200
001201 TGTCCTCCTT GCTTCCCTTG TTTTTTTTTT TTTTCACATT CACACATATG ATGATCCAGC ATTCTACATA TTTTATTTAT 001280
001281 CTTATTTATT TTCAGTCTTC TCCACTCAAA TGTATGATAT TTAAGGCAGG GGTTTTAAAA TGTCTTGTTC TTGGCCAGGC 001360
001361 ATGGTGGCTC ACACGTGTAA TTCTAGCACT TTGGGAGGCC GAGGCAGGTG GAGCACCTGA GGTCAGGAGT TCAAGACCAG 001440
001441 CCTGGTCAAC ATGGCGAAAC CCCGTCTCTA CTAAAAATAC GAAATTAGCC AGGCGTGGTG GCGGACGCCT GTAATCCCAG 001520
001521 CTATAATCCC AGCTACTCAG GAGGCTGAAG CAGGAGAATC GCTTGAACCT GGGAGGCAGA GCTTGCAGTG AGCCGAGATC 001600
001601 ACGCCACTAC ACTGCAGCCT GGGTGACAGA GTGAGACTCC ATCTCAAAAA ACAACAACAA AATAAATAAA TAAATAAAAA 001680
001681 TAAAAT
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Predicted Small Protein

Name ENST00000432429.1_smProtein_1247:1513
Length 89
Molecular weight 10015.7378
Aromaticity 0.125
Instability index 56.5954545455
Isoelectric point 10.4432983398
Runs 11
Runs residual 0.00636363636364
Runs probability 0.038380626616
Amino acid sequence MMIQHSTYFIYLIYFQSSPLKCMIFKAGVLKCLVLGQAWWLTRVILALWEAEAGGAPEVR
SSRPAWSTWRNPVSTKNTKLARRGGGRL
Secondary structure LEEEEEEEEEEEEEEELLLLLEEEELLLLHHHHHHLHHHHHHHHHHHHHHHHHLLLLLLL
LLLLLLLLLLLLLLLLLHHHHHHLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo oooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiii
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