ENST00000431369.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000431369.1 |
Source |
Gencode19 |
Same with |
lnc-OFCC1-1:1,NONHSAT107661 |
Classification |
intergenic |
Length |
661 nt |
Genomic location |
chr6-:9124454..9162010 |
Exon number |
3 |
Exons |
9124454..9124939,9141254..9141373,9161956..9162010 |
Genome context |
|
Sequence |
000001 GAAAGATTAG CTGAGTTTTT CTGCTGACTT AACTGTTGAA TAGCATCATC CTCAGGCACT ACCAAAAGTG TTTAGAGCAC 000080
000081 TCTGTTGAAA ATGGCAGTAT TTGAAGAAAC TGGATGTCAC TTAAAATATG ATCCTTGGAT AAACATCACA TGCTGCTGGC 000160 000161 CTTCTTACAA AATGAGTGTG AGTGAAGTGC TTGGCTCTGC GAGATGGTCC TGGAATATCT TCACCACTCT TCACAATTAC 000240 000241 GTCCTCTTGC ATTCCCACTG ATCCTTCAGA ATTGTGTGGC CTTTCAACTT TCTGAAAGGC CTTCACTGTC TCTTAATTCA 000320 000321 AATTCTCCAC ATGTAAATAC AAGTCAGATC ACCTTACAAT TTAATCTTTA AGCAAAACTG TAAATCATCA TTTCCCGCGA 000400 000401 CATTACAATT GTTGGGGGAA AGGTGTTTGG TGTCACATCT AATGGCTTGA AAACTCGGAG CATCTCTGGA CACAGTCAAT 000480 000481 ATCCAGGTCT CAAATATGCA TTTACTGTGT TTATTATAAT GACTGCCTTT GTATTCACTG CAATCATTTT CTACTGTTTC 000560 000561 TTCCTTTGTG TAATCATTTC TTCCCTTCCC CTCCATTGTA TTTTTTTAGA GTAATTCTAT ATTCTGTTTT TGAATACACA 000640 000641 CTTCTCTTTC TTTTAAAATA A |
Predicted Small Protein
Name | ENST00000431369.1_smProtein_203:370 |
Length | 56 |
Molecular weight | 6248.1097 |
Aromaticity | 0.0727272727273 |
Instability index | 59.8709090909 |
Isoelectric point | 6.80731201172 |
Runs | 7 |
Runs residual | 0.0242424242424 |
Runs probability | 0.0485401367754 |
Amino acid sequence | MVLEYLHHSSQLRPLAFPLILQNCVAFQLSERPSLSLNSNSPHVNTSQITLQFNL |
Secondary structure | LEEEELLLLLLLLLHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLEEEEELL |
PRMN | - |
PiMo | - |