ENST00000430051.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000430051.1

Source

Gencode19

Same with

lnc-AC011239.1.1-1:2,NONHSAT069542

Classification

intergenic

Length

572 nt

Genomic location

chr2-:23598235..23604126

Exon number

6

Exons

23598235..23598331,23598469..23598555,23599109..23599200,23599655..23599797,23602995..23603112,23604092..23604126

Genome context

Sequence
000001 ACTCTGTGCT GGCGACTCTC AGGAAGACAG GGAAGAGTCT CACTCTATCA CCCAGGCTGG AGTGCAATGG CATGATCTTG 000080
000081 GCTCACTACA ACCTCTACCT TCCAGTTCAA GAGATTTCTC CTGCCTCAGC CTCCGATGTA GCTGAGACTA CAGGGCTACC 000160
000161 TGGTTTCTGC CTGAGCAGCA AGTGATGAAG GAGAGTGAGC GTATGAGAGA GTAAGAGAGT GAGCCCAATC GTGGACTGAC 000240
000241 CACACAATTG ACCCTGGTTT ACTGTGAGAA AGGACACAGA CTGTGAACAC CAGGAGAAAA TCAAGAAAGG AACTGCTCTG 000320
000321 TGATTGTGGT CAGTTTCTGT GGCGCCAGCT CTTCCTGACT GCCTGACAAC CACGATGTAC CAGGCAAGCT TGACTACATT 000400
000401 TCCCAGCGTC CTTTGGAGTG AGACTACATC TCCCAGCATC CTGGCAGTTA GACAATTTTC TAGTCTCCTT TGCAGGGATC 000480
000481 TTGGAAGCCC CATGTTGAAG GTGGCAGAGC AACAAAAATT GAGGAAACCC TGAATCCCTG AATTACTATT TGGAGATGAC 000560
000561 CACCCACTAA TT
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Predicted Small Protein

Name ENST00000430051.1_smProtein_374:532
Length 53
Molecular weight 5841.7783
Aromaticity 0.0769230769231
Instability index 65.9788461538
Isoelectric point 9.62286376953
Runs 7
Runs residual 0.0157540199913
Runs probability 0.0383703030762
Amino acid sequence MYQASLTTFPSVLWSETTSPSILAVRQFSSLLCRDLGSPMLKVAEQQKLRKP
Secondary structure LLLLLLLLLLLEELLLLLLHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHLLL
PRMN -
PiMo -