ENST00000429816.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000429816.1 |
Source |
Gencode19 |
Same with |
lnc-CWC22-1:1,NONHSAT075844 |
Classification |
intergenic |
Length |
562 nt |
Genomic location |
chr2-:181436439..181557181 |
Exon number |
4 |
Exons |
181436439..181436558,181465461..181465634,181467156..181467198,181556957..181557181 |
Genome context |
|
Sequence |
000001 GGGGAAAACT CACCCTGAGG ACTTGAAATT GTGTCCAGAA CTGGTGGGTT CTTGGTCTCA CTCACTTCAA GAATGAAGCC 000080
000081 GCGGACCCTC GCAGTGAGTG TTACAGTTCT TAAAGGCGGC GTGTCCGGAG TTTGTTGCTT CTGATGTTCA GATGTGTTCG 000160 000161 GAGTTTTTTC CTTCTGGTGG GTTCGTGGTC TCGCTGGCTC AGGAGTGAAG CTGCAGACCT TCGCGAGATG AAATTCGATT 000240 000241 GGCTCCCACA TTGAACACTG TGTTGGAAAT GAGGAAACTG AGGTACAGAG AGGCCAAGCA CATTGTGAAG GTCACACACC 000320 000321 TAGGAGAGGA AGGAGGTGGA ATTCTCACTC AGCTGATGTG GCCTCAGCAC CTGCACTCTC CTGTTTTCTG CTGAACTGCA 000400 000401 TTCTGCTCTC CCATTTTATG CCTGTGGAAC AGTAAAAGAT GGGTATGACA AAAAGCAAGA CTTTGTCTTG CTTTCATCAG 000480 000481 TGCATGGACA TTTGAGCTCT TTCAACTTTT TGGCTATGAT GAACATGTTT GGAATGCTAT GAACATTTAT GCACAAGTTC 000560 000561 TG |
Predicted Small Protein
Name | ENST00000429816.1_smProtein_143:253 |
Length | 37 |
Molecular weight | 4474.1995 |
Aromaticity | 0.194444444444 |
Instability index | 80.2666666667 |
Isoelectric point | 9.48614501953 |
Runs | 7 |
Runs residual | 0.013986013986 |
Runs probability | 0.0222449340097 |
Amino acid sequence | MFRCVRSFFLLVGSWSRWLRSEAADLREMKFDWLPH |
Secondary structure | LEEEEHHHHHEELLHHHHHHHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |