ENST00000429781.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000429781.1

Source

Gencode19

Same with

lnc-PTCH1-3:3,NONHSAT133397

Classification

intergenic

Length

2825 nt

Genomic location

chr9-:98602882..98637869

Exon number

3

Exons

98602882..98605032,98612509..98612574,98637262..98637869

Genome context

Sequence
000001 CTTTCTGTGG GCGGAGCAAT CTTCCCGATG TCTCTTCCCT CTGAGGCCAG TAGCAGGAAG GGCCTCGGGA GTTGCGAGTG 000080
000081 TCGCGAGGTT TGAGGTCGCT CGGTGGGCCG GGCGCTGTGC GAAGCTAGAA ATAACTGGGG GCATGGAGAA TGCGGTGGCT 000160
000161 GTAAAGGGCC GCTGAGGCGG TGGAGGCCTG GCAGAGAGCG TCCCCGCGGT CGCGGCTTCT GGCTTCTCTG TGGAGCTTGG 000240
000241 TTCTTCCGTG GTGGTGCAGC ACCCCAGGAA CTTCAGGAAC CAGTCCTTCC TTGGAGAGCT CCCCGGGACA GCCACGGGGG 000320
000321 CCAAGTGAAA CTAGCGCGTT TTCTTGGATC CTACACTTTA TAGTGAGTCA TAAATACTTT AAATACAAAG CCAACAACAT 000400
000401 TTGCTGCAAA TAAACGTAAA AATACTGTTA AAGTGTAAAG TGTTTTCCTC CGTACCATCT GACGTTTCTG GCGGTTCGTT 000480
000481 GAACGCGAGA GAACGCTGAG CCGTCTGCAC TGAGCCCGGG AGCATCTTCA GGGCAGCGCC GCCCACGCGC GAGGTGAATG 000560
000561 AAGGACACGG CCTCTTGACA CTCCCAGGCA GCACAGATAG ACGGATCCAT CCCAGTTTCT GACCTGTAGC ATAGTCCCTC 000640
000641 TCTCTGAAGA ACTTCCTGTA ATATTTTTTG CTAGATGGAG TCTTGCTCTG TCACCAGGCT GGAGGGCAGT GGCGCCATCT 000720
000721 CGGCTCACTG CAAACTCTGC CTCCCGGGTT CAAGCGATTC TCCTCCCTCA GCCTCCTGAG TAGCTGGGAC TACAGGCGTG 000800
000801 TGCCACCAAG CCCAGCTAAT TTTTGTATTT TAGTAGAGAC AGGGTTTCAC CATGTTGGCC AGGATGGTCT CGATCTCTTG 000880
000881 ACCTCGTGAT CCACCCACCT CGGCCTCCCA AAGTGCTGGG ATTACAGGCA TGAGCCACCA TGCCCAACCC AAGAATTTAC 000960
000961 ATTTCTAACA AGTTCCCAGG TAATGCTTAT GCTGCTGGCC TAGAAACCAC ACTTGAAGAA ACCACTCCTT CAGAAAATAG 001040
001041 TTCTTGTCTC CCAAGAGGAG AAGGAATGCG AAAGAGGATT TTAAAGAAAG CTTCCAAATT GTGGCCAACT CTGATAGAAG 001120
001121 ATCATAGACA CTTGAAACTC AGTGCTGAAG AGGATGCTGT AGTCATGCCC AGGCTCAATG GGAAAGAGCT CCAGGATGAG 001200
001201 GGGGGCTTGC ATACCATGGG ACGGGGGAGG AATTGACAAC AAAGATCCAC ATATTTATCA TCCACAAGGT TGGTTGGTCT 001280
001281 TAATCTTGTG CTTGTCGTAT CCATTTTATA ATACAATCAC ATTCGTACAC TTGACTTTAA TTTACATCAC AGAGTTATAT 001360
001361 GTCTTTGATG CAAGACTTCA GCAAAATGGC CCAGCCAGGG TGTTAGGGTT TTCTGGCACT CTACCCATGG AAGAGGAGAG 001440
001441 GATTGGAATG AAGAGAGGAA GGCACAAGGG AGAAAGCTGA CATATGGAAT CAAGTTGGAG AAAATAGTGG GAAATAGAAA 001520
001521 AGTGTGTGCA AAGATTTATT GTGAATTCCT AAGTACTCAA TTAAAAGCAG ACCAAAACTT GAGAATTGGG TTGAAGGCTA 001600
001601 AGGACTGTGA GTGGGGAAAG GGTGGACAAT GCATTTTCAG GGACCAGCCC CATCACTGGC TCAGGGTTTC CTAGGCACGG 001680
001681 CTCTTCTCAG GCAAGCTGTG CTGGAAGCCT GGATTACATC TGGAATTCAA GAACTCTCCC TGTTTCAAAT ACAGCCTAGA 001760
001761 GAACACAGGT GGTCCACAGG CTGCATTTTT GCCACCCACA ACTTTGGGCC ACATTTAGAG GAGCCAGTGA AAGAATCAAT 001840
001841 CTGCTGAGTC AGAAGAAAAT TCAACAAGCT CTTATCCAAA TAGGCACTCG TACGTGTTGC CATATTAAAG ATGCAAGTGG 001920
001921 TCCCATTAGT AATAAACTCT TCAGACACAA AAGGCATTTG TGTCACAAAT TCTGTACAAG TTATAAATAG AGGGAAAAGC 002000
002001 ATCTGGGAAT GTGAAGTCAA GAGTCCTGTG TTTTGACTCT AGCTCAAGTG CAGACCAAAA ACATAGGCGT TCACCTCTCA 002080
002081 GTTCAGTTTA ACAATATTTC TCAAGGATCT ATCTGTGAGG CACTTGGATG CATGGTCTAT AAATAAGACC AAGTCCCTTT 002160
002161 CTTGAAAGTG CTTAAAATCT AATGAAGGGG AGGGAGATAA ATACACAAAT CAATGGATTC AAGACAGGGT ATTGAAGATG 002240
002241 TTATGAGAGT AATACAAGTA AAACATTGAC CAAGTTAAAA AGGACAAAAC AAAACAGCAA GTAAGGTGTT AACTCCTCCA 002320
002321 TATTCCATTA GAATACTCTT AGCATGCCCA GTTCCTGACA CAAAAGTAGG CATTTGATAA ATGGCTCTTT GAGTAAATTA 002400
002401 AATGAGCATT ATCTCTTCCC AGACCTAAAC AGCCCACCAA TGACCTAGTT TACAATTTAT GCACTGTTAA TTTGCCTAAT 002480
002481 TAGACCCAGT ATCTACTTCT GTGCCACAAA ATCATATGAT TAGAGCATTA ACAGTCATGA AACGCTTTAT AGACCTGGAC 002560
002561 TTCTCCAATC GAGGACATTA CAATCTACTA AATAAAGAAT AACTTGAAGA GGGATTTAAA TAGAGGAGGG TATTGAGAAA 002640
002641 GCCATAAATT TAGTAAAAGA GAAGTTAAAA TCGGCACGTG GGGTTCATAG CATTAAAGGA CATGATTTAC CTCTGAAACT 002720
002721 CATGTTTGTT TCTACCAGAT GAGCAGGAAG AGATTCCAAA GAGGAAAAGA TGATTAGAAG TAGGAATAAC TAGCTTGGGC 002800
002801 AAAGTGGCAA GACCTCCATC TCTTT
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Predicted Small Protein

Name ENST00000429781.1_smProtein_1628:1846
Length 73
Molecular weight 8030.0984
Aromaticity 0.0972222222222
Instability index 50.7791666667
Isoelectric point 6.01007080078
Runs 11
Runs residual 0.0118613138686
Runs probability 0.038107626343
Amino acid sequence MHFQGPAPSLAQGFLGTALLRQAVLEAWITSGIQELSLFQIQPREHRWSTGCIFATHNFG
PHLEEPVKESIC
Secondary structure LLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHLHHHLLLEEELLLLLEELLLEEEEELLLL
LLLLLLLLLLLL
PRMN -
PiMo -