ENST00000427686.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000427686.1 |
Source |
Gencode19 |
Same with |
lnc-ZNF449-4:1,NONHSAT138690 |
Classification |
intergenic |
Length |
560 nt |
Genomic location |
chrX+:134386524..134387506 |
Exon number |
2 |
Exons |
134386524..134386752,134387176..134387506 |
Genome context |
|
Sequence |
000001 GTAAGATTCA TACCTGCTTC ACCAGTGATT TTCAAAGGAG GCAAATCCTA TTTGAAGCTA AAGTCACATA AAGAGATTTG 000080
000081 GAATGAGGAA ACAAATTATA GCAGCCTGCA AGTTGTAGAA TGAAGAAATG CAAATGTAAA GTACTGAACT TTGTCATGGA 000160 000161 TAGATTTACC AAAGAGAATT ACTCTGCATA ACATGAATAA TGGAGTTCAG AAGGAAGCCC ATATCCCAGA CTTCCTCGGT 000240 000241 TGTGCTGTTT TACTGAGGTT GGGTGGAGTC AACACATCAT GGATAAAGAA GTCCCTAAAG GCAGTCCCAG GGAGCCCGCA 000320 000321 CTGAACATCA AGAAGTCAGA CAAATCCTTC AAACGCAAGA AGCCCACCGA AAATGTGCTG ATCTTTTTAA TCAACAGACA 000400 000401 ACTGGGCAGG CACAGAAGTG ACATCGACCT GTCAAGATGG GTGTGGATGC TGTCATAAAG CAACTCTAGG GTGGACATGG 000480 000481 CCTTGGACAA AAAGTCATGT GGCTTACGTG CTGAAGCCTG CCCATATTTT TGAGAAATTA AATATAATTA GAACAATAAA 000560 |
Predicted Small Protein
Name | ENST00000427686.1_smProtein_278:457 |
Length | 60 |
Molecular weight | 6991.1132 |
Aromaticity | 0.0677966101695 |
Instability index | 61.9728813559 |
Isoelectric point | 10.4325561523 |
Runs | 6 |
Runs residual | 0.0427616233867 |
Runs probability | 0.0237296119649 |
Amino acid sequence | MDKEVPKGSPREPALNIKKSDKSFKRKKPTENVLIFLINRQLGRHRSDIDLSRWVWMLS |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHLLLLLLLLHHHHEEELL |
PRMN | - |
PiMo | - |