ENST00000427579.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000427579.1

Source

Gencode19

Same with

lnc-ETAA1-7:1,NONHSAT071258

Classification

intergenic

Length

567 nt

Genomic location

chr2+:67267678..67269098

Exon number

2

Exons

67267678..67268197,67269052..67269098

Genome context

Sequence
000001 ACACACACAC ACACACACAC ACACACACAC ACACACACAC ACACGCTTTA CCTATTCATC CCATCCCTCC CCTATCCTCC 000080
000081 CAACTATCCA CCCACTAGTC ATCATCCATC CCATCTAGGA TTGTCAGTTT TAAGAAAATC AAGACACCCA GTGAAATTTC 000160
000161 AATTCAGATA AACAACAAAT AATACTTTAG TATAAGTCCC ATGCAATACT TAGGACACAT TTTTTCTGAA ATATCATTCA 000240
000241 CCATTTATTT TACATTCAAA TTTCACTGGA TGCCTGTATT TTATCTGGCA AACCTAATCC GATCACAAAT GTCTACATCT 000320
000321 TTTCCATTTA TCTCCTAATT CCATGACTCT TTCAACTGCT TTTCTCCTTT AACTCCTATT ATTTCAGATT TCAGCTAAAC 000400
000401 AAACTACAAC CTATTTTCCC AGTGTTTCCA AACCTGTCCC GAGGCAGAGA TGATTGTAAA GAGCCCCTCA GGAGCACTTA 000480
000481 TTTGTGGTTT CTAGGCTGAA GGCTGGCTGT GCAACTTTGG CATTCTTGAT CTATCACCTG TGACTGAAAG CTCCCAAACT 000560
000561 GATGCAA
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Predicted Small Protein

Name ENST00000427579.1_smProtein_200:337
Length 46
Molecular weight 5475.3617
Aromaticity 0.266666666667
Instability index 82.4335555556
Isoelectric point 8.23004150391
Runs 9
Runs residual 0.0377525252525
Runs probability 0.0236805432884
Amino acid sequence MQYLGHIFSEISFTIYFTFKFHWMPVFYLANLIRSQMSTSFPFIS
Secondary structure LLEELLEEELEEEEEEEEEEEEELHHHHHHHHHHHHHLLLLLLLL
PRMN LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL
PiMo oooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiii