ENST00000426725.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000426725.1 |
Source |
Gencode19 |
Same with |
lnc-RPS7-1:10 |
Classification |
intergenic |
Length |
836 nt |
Genomic location |
chr2+:3606168..3609321 |
Exon number |
2 |
Exons |
3606168..3606588,3608907..3609321 |
Genome context |
|
Sequence |
000001 GAAGGTCGAG ATGGACCATG TTGGGCCCCT TCTCTCCCCG CCCCCAGGCC GCAGTTCGGG GGCCACGCCC CGGCGTGCTC 000080
000081 GGGTCACCGC GGGAAGCCCT TGAACCCCCT GGCGCCCGGC ACCCACGTGC GGTAACCGCG GCTCCTCGAG AGCTCCAGGG 000160 000161 ATGCGGATCT ACAGTAAGGG CTGTGGCCAG ATGAATGAAT GCACATTTTT TAGTGGGCAG AAAGATGTTA GAATTCATGA 000240 000241 ATTAGAATAA GCACAAAGGA GGGCGAGAGG GGAGGCCGTG GAAGCCGCAT TCCTCCCCTT GCCTTGGGCG CCCACCCCCG 000320 000321 AAGGGGCGCG TCCCCTCCCT GCTCCACTGC ACGTGGGTGT TTAACCAGGG GATATCCAGT GCCTCAAGCA CCACGACCCG 000400 000401 GGAGAAAACT GAGTTGAGAA GGGTCCATTC AAGAATTGTG CCCACAATAT ACCAGGCACT TGTCCAGACC TGCATCGTCC 000480 000481 AATGCCCACC TCGACCTCCC AAAGTGTTGG GATTAGAGGC GTGAGCCACC GCGCCCTGCC TGCATGTGGC TATTGAGATG 000560 000561 TGCTGTATGA TACACACCGG ACTTTGAAGA CTCAGTGTGA AAAATAAAAA GAATTTTAAG AGGGGTGGGG GTCGAGGGGA 000640 000641 GGCAGAGCAG TAGGACAAAT AGCTAATGCA CGCAGGGCTT AAAACCTAGA CAACAGGTTG ATGGGTGCAG CAAACCACCA 000720 000721 TGACACATGT TTATCTATAT AGCACCTACA TGTTCTGCAC TTGTATCCTG GAACTTAAAA TTAGAAAAAA AAAATAATAA 000800 000801 AAGCCAACAT GGCATTCATT ACTGCCAAAA AAATTA |
Predicted Small Protein
Name | ENST00000426725.1_smProtein_17:193 |
Length | 59 |
Molecular weight | 6007.8763 |
Aromaticity | 0.0172413793103 |
Instability index | 45.7775862069 |
Isoelectric point | 11.9033813477 |
Runs | 9 |
Runs residual | 0.0014209928003 |
Runs probability | 0.0209915798151 |
Amino acid sequence | MLGPFSPRPQAAVRGPRPGVLGSPREALEPPGARHPRAVTAAPRELQGCGSTVRAVAR |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLHHHLLLLLLLLHHHHLLLLHHHHLLLLEEEEEEL |
PRMN | - |
PiMo | - |