ENST00000426618.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000426618.2

Source

Gencode19

Same with

lnc-EIF3M-2:6,NONHSAT018666

Classification

intergenic

Length

2144 nt

Genomic location

chr11+:32459475..32461618

Exon number

1

Exons

32459475..32461618

Genome context

Sequence
000001 GAGGTGGGAG GAGTTCCCTG CAGCCTGCGG GGCCAAGAAG AAAGTGCTAA GCTGAGGAGC CGCAGTCGGA GGACCCCAGG 000080
000081 GACCCGACAG GAAGTCTCCG TACGACCCCA ACGGATCCAC ATGCCCGGAA GCCCAGGCGA CACTAAGCCA GCGCTGGGGA 000160
000161 ACTGACGTAC TCCTGCAGTC GCAGGGCGCT CCATGCCTCT CTGTCCTCTT CTTTGTTGTG GGTAACGTTC TCTGCGGGAG 000240
000241 ACCTGAGGTT TTCCAAGGGG GACATGCCAG CTACACTGGC CTTGGCGCCC TGAGCTAAGC ACCAGGACTC ACAGCCTAGC 000320
000321 ACGAAGGCAG GTAGCACCTT CACCCGCCGC GGACGATAGG CGCTCTCCTG TACCTCCTTT AGCTCGCGAG GCCCGCCCTT 000400
000401 CGCGAGGTCC CAGAGAAAAG CAGGCTGTGG AAAACTGGGC GCCCCCTTCT TTCACCCACC TTCTTACCCC TGTCAGCGCC 000480
000481 GAGATCTGTA GCAGAGGTTC CTGGTCTGAA CCACCGATTG GCAAAGAAAG CTGCAGATTA AACTTCTCGT TTTACAGAGA 000560
000561 AGGAAACTGA GGCCCAGACA GCCGAAGGAG AGGCAGTCTA TGGAGCGCAG CGGTAAAGAG CAAGGGGTTG GTGGCCCCAG 000640
000641 AATGGAACCT CAGCTCTGCC AGGTAACCAA CAGCTGTGTG ACCCTAGACG AGTTCCGCAG TCTCTCTGAG CCTCAGTTTC 000720
000721 CTTACTGGTC AAACGGGATA ATGGGATACT AGCGCCCACC TCATAGAGTT GTTCTGAGGA TTAGATAGGA GAGCAGTGTG 000800
000801 GGCCTTTGAC TCAATCAACT TTACAGTTTT TGTTACTACT ACTGTTTAAG GACAGGAAAC AAGTTAGTGG CAACGCCGAG 000880
000881 CTGAAACCCG GGTCTCTCAA CGTCCAGTTG GAGGTTTTAC CCACCACCCC TCTACCTCTT CAGAGCTAAT GGGATGCAGA 000960
000961 GGCGAGGACA GCCCCTGGAA AACCATGTGG CGTTGATACA CTGGCAAAGC GCAGGCATCC CGGCCTCGAA GGTGCATAAT 001040
001041 TATTGCAATA TGAAAAAATC GAGGCTGGGT AGGAGCAGGG CAGTGAGGAT TTCTCAACCC TTACTTTCAC CCCGGCGCTG 001120
001121 TCCACTGCAT CTGACAGAGC GCGGAGCTGG GCTGCTACAG CCGCAACCCC AGGGACCAGT GCGCACGCCT GGGCCGCCCT 001200
001201 CCGGGAGTCA CCCAGCGGCC GCGGACAACT GAATAAACAC CCCAAAGCGC TGCGGTCGGT CAAGGGCGGG GACAGCCACA 001280
001281 CTGCGCGCGG GGCCCGCAGG CCGTAATAAA GAGTGGCTCG ACCTCGCTGC TGCCTGTCGC GGGAGAGGAA CAAGCTTTCG 001360
001361 ACTAGCGCCT CTCCCCGGGG CCCGCGCCCC GAGCCCCACG CGCAAGACAG CCCAACAGCT GTTCCTCCCC TCCCCGCCGA 001440
001441 CTCCAACTCT TCGGAATCTG CCCACTCGGG GCTGCAGGGC AAGTGTTTAG GATGGTTCCC AGCCCCGCGC TGGCGGTGAA 001520
001521 AATTTCAACG TCATTCCTTC AATTAAAAAA AGGGGGGGGC AAGGGAGGGG CTTTGTGATA ACTACTCCCA GCTTCTTCTG 001600
001601 ATCATTTCAA AATTAAGTCG ATTTTTTTTA ACCAGTCCCC ACTTACTGTC CTAACTCTCC TCGCTGACCC TATCTGGGAG 001680
001681 CCCGGAACCG TTAGGTACTG CCGAATGCGG TGCAAAATTT CCCCCTCTCC CCCAGTTCGC AGTGCCTGGA GCCGCTGGGG 001760
001761 TTACTCGTCT GTTCTGATGC CACCGCGAGA TGGTCCCCGA GCTCCCCGAG AGTCCTCAGT GAAAGGATTC CGCGGCACTG 001840
001841 CCTCTATTAT TATACCGTAA ATCTTTTTAA ATTCTGGAAC TAATTATATA GAGGATATGT CTCAATTTGT TCTGCATTAA 001920
001921 TGCCACAGTG GGGATGGAGG CCAGGCCGTG GCCAGAGCAG ATACGTAGGC CCATGAAATT GATGAACTGA GAGTTGCTTC 002000
002001 CAGTCCTGAG CGCACCATCT GGAATTCCAG TCTGAGGTTA CAATTAGAAC TCCTGACCCC AGATTCAACT TTGCAAACAA 002080
002081 CAGGGGAAAA AAATGGGGAA AAGAAAAACC ACGAGAGAGG GAAAAAAAAT TATTCTGCAC CTGT
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Predicted Small Protein

Name ENST00000426618.2_smProtein_953:1231
Length 93
Molecular weight 10038.4342
Aromaticity 0.0217391304348
Instability index 69.5108695652
Isoelectric point 11.6508178711
Runs 9
Runs residual 0.0373787926181
Runs probability 0.0337985043868
Amino acid sequence MQRRGQPLENHVALIHWQSAGIPASKVHNYCNMKKSRLGRSRAVRISQPLLSPRRCPLHL
TERGAGLLQPQPQGPVRTPGPPSGSHPAAADN
Secondary structure LLLLLLLLHHHHHHEEHHHLLLLHHHHLLLLLLLLLLLLLLLEEEEELLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -