ENST00000426618.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000426618.2 |
Source |
Gencode19 |
Same with |
lnc-EIF3M-2:6,NONHSAT018666 |
Classification |
intergenic |
Length |
2144 nt |
Genomic location |
chr11+:32459475..32461618 |
Exon number |
1 |
Exons |
32459475..32461618 |
Genome context |
|
Sequence |
000001 GAGGTGGGAG GAGTTCCCTG CAGCCTGCGG GGCCAAGAAG AAAGTGCTAA GCTGAGGAGC CGCAGTCGGA GGACCCCAGG 000080
000081 GACCCGACAG GAAGTCTCCG TACGACCCCA ACGGATCCAC ATGCCCGGAA GCCCAGGCGA CACTAAGCCA GCGCTGGGGA 000160 000161 ACTGACGTAC TCCTGCAGTC GCAGGGCGCT CCATGCCTCT CTGTCCTCTT CTTTGTTGTG GGTAACGTTC TCTGCGGGAG 000240 000241 ACCTGAGGTT TTCCAAGGGG GACATGCCAG CTACACTGGC CTTGGCGCCC TGAGCTAAGC ACCAGGACTC ACAGCCTAGC 000320 000321 ACGAAGGCAG GTAGCACCTT CACCCGCCGC GGACGATAGG CGCTCTCCTG TACCTCCTTT AGCTCGCGAG GCCCGCCCTT 000400 000401 CGCGAGGTCC CAGAGAAAAG CAGGCTGTGG AAAACTGGGC GCCCCCTTCT TTCACCCACC TTCTTACCCC TGTCAGCGCC 000480 000481 GAGATCTGTA GCAGAGGTTC CTGGTCTGAA CCACCGATTG GCAAAGAAAG CTGCAGATTA AACTTCTCGT TTTACAGAGA 000560 000561 AGGAAACTGA GGCCCAGACA GCCGAAGGAG AGGCAGTCTA TGGAGCGCAG CGGTAAAGAG CAAGGGGTTG GTGGCCCCAG 000640 000641 AATGGAACCT CAGCTCTGCC AGGTAACCAA CAGCTGTGTG ACCCTAGACG AGTTCCGCAG TCTCTCTGAG CCTCAGTTTC 000720 000721 CTTACTGGTC AAACGGGATA ATGGGATACT AGCGCCCACC TCATAGAGTT GTTCTGAGGA TTAGATAGGA GAGCAGTGTG 000800 000801 GGCCTTTGAC TCAATCAACT TTACAGTTTT TGTTACTACT ACTGTTTAAG GACAGGAAAC AAGTTAGTGG CAACGCCGAG 000880 000881 CTGAAACCCG GGTCTCTCAA CGTCCAGTTG GAGGTTTTAC CCACCACCCC TCTACCTCTT CAGAGCTAAT GGGATGCAGA 000960 000961 GGCGAGGACA GCCCCTGGAA AACCATGTGG CGTTGATACA CTGGCAAAGC GCAGGCATCC CGGCCTCGAA GGTGCATAAT 001040 001041 TATTGCAATA TGAAAAAATC GAGGCTGGGT AGGAGCAGGG CAGTGAGGAT TTCTCAACCC TTACTTTCAC CCCGGCGCTG 001120 001121 TCCACTGCAT CTGACAGAGC GCGGAGCTGG GCTGCTACAG CCGCAACCCC AGGGACCAGT GCGCACGCCT GGGCCGCCCT 001200 001201 CCGGGAGTCA CCCAGCGGCC GCGGACAACT GAATAAACAC CCCAAAGCGC TGCGGTCGGT CAAGGGCGGG GACAGCCACA 001280 001281 CTGCGCGCGG GGCCCGCAGG CCGTAATAAA GAGTGGCTCG ACCTCGCTGC TGCCTGTCGC GGGAGAGGAA CAAGCTTTCG 001360 001361 ACTAGCGCCT CTCCCCGGGG CCCGCGCCCC GAGCCCCACG CGCAAGACAG CCCAACAGCT GTTCCTCCCC TCCCCGCCGA 001440 001441 CTCCAACTCT TCGGAATCTG CCCACTCGGG GCTGCAGGGC AAGTGTTTAG GATGGTTCCC AGCCCCGCGC TGGCGGTGAA 001520 001521 AATTTCAACG TCATTCCTTC AATTAAAAAA AGGGGGGGGC AAGGGAGGGG CTTTGTGATA ACTACTCCCA GCTTCTTCTG 001600 001601 ATCATTTCAA AATTAAGTCG ATTTTTTTTA ACCAGTCCCC ACTTACTGTC CTAACTCTCC TCGCTGACCC TATCTGGGAG 001680 001681 CCCGGAACCG TTAGGTACTG CCGAATGCGG TGCAAAATTT CCCCCTCTCC CCCAGTTCGC AGTGCCTGGA GCCGCTGGGG 001760 001761 TTACTCGTCT GTTCTGATGC CACCGCGAGA TGGTCCCCGA GCTCCCCGAG AGTCCTCAGT GAAAGGATTC CGCGGCACTG 001840 001841 CCTCTATTAT TATACCGTAA ATCTTTTTAA ATTCTGGAAC TAATTATATA GAGGATATGT CTCAATTTGT TCTGCATTAA 001920 001921 TGCCACAGTG GGGATGGAGG CCAGGCCGTG GCCAGAGCAG ATACGTAGGC CCATGAAATT GATGAACTGA GAGTTGCTTC 002000 002001 CAGTCCTGAG CGCACCATCT GGAATTCCAG TCTGAGGTTA CAATTAGAAC TCCTGACCCC AGATTCAACT TTGCAAACAA 002080 002081 CAGGGGAAAA AAATGGGGAA AAGAAAAACC ACGAGAGAGG GAAAAAAAAT TATTCTGCAC CTGT |
Predicted Small Protein
Name | ENST00000426618.2_smProtein_953:1231 |
Length | 93 |
Molecular weight | 10038.4342 |
Aromaticity | 0.0217391304348 |
Instability index | 69.5108695652 |
Isoelectric point | 11.6508178711 |
Runs | 9 |
Runs residual | 0.0373787926181 |
Runs probability | 0.0337985043868 |
Amino acid sequence | MQRRGQPLENHVALIHWQSAGIPASKVHNYCNMKKSRLGRSRAVRISQPLLSPRRCPLHL TERGAGLLQPQPQGPVRTPGPPSGSHPAAADN |
Secondary structure | LLLLLLLLHHHHHHEEHHHLLLLHHHHLLLLLLLLLLLLLLLEEEEELLLLLLLLLLLLL LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |