ENST00000426459.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000426459.1 |
Source |
Gencode19 |
Same with |
lnc-OPA1-1:2,NONHSAT094011 |
Classification |
antisense |
Length |
795 nt |
Genomic location |
chr3+:193271201..193272701 |
Exon number |
3 |
Exons |
193271201..193271293,193271496..193271556,193272061..193272701 |
Genome context |
|
Sequence |
000001 GAGAGAGAAA AAAAATGTTT CAGAGGAAGG AGCCCCTGCC TTCTGGTGAA GAGTATTCAA GATGAAGATA AACTTTTCAA 000080
000081 CTTAATATCG AGACTTTGAT AGCAGAAGGG ATCTACTCTT GAAAGTCCAA AAAATGTTGT TGCTATAGGA ACAGACTCGG 000160 000161 TGAACAAGAC ATTTGAGAAG AGAAGGTCAA AGACCCAGCT GCACTTCTGC TTCACTGCTG AACTTCTGCT TCTTCCTATC 000240 000241 AGGGAATACA CTGCTCCTCA CATTAGGGAT TTCCTAAAAT TGTTAGGTGT TTTGAACAGA ACTGGCTATA CCAATGAGGC 000320 000321 TCAAACAAGA ATCATAAAGT GCATGGTGCT TCTCTCCCTC TCTGTTTTCT TTAAAAAGAA AACATTCTTG ACAAGATGAA 000400 000401 TACAATATTT TCATTCTAGC AAATTTCTGC TGTCAGAGGT TATATTTACA GGATAGAGAG ATTTCTCAAA CATGACCTTT 000480 000481 TCTCGTGTAA TACCAGAGTG AAATTTTAGA AAAGTCTGTG TGTGTGTGAT GCGTGCGTGT GTGTGTGTGT GTGTGTGTGT 000560 000561 GTGTGTGTGT CTCGCAGGCT GAGAAGTGGG ATGGGAAGAA GGGAATGTGG CTAGAATCTT ACCATCTCAT TCTCTTCTCC 000640 000641 TTCATTGAGC AGAGCGTGCT GGCCCTTCTC AAAGTGTCCC ATGAAAAAGT TATTCCACAC CTCCTCCCTG ACCTTGTCGT 000720 000721 GCAGACGCTT CCAGGATGAA CTCCAACTCG CCGAGCCACC GCAGCTCCTC AGCTGACTAA AAGAGTTAAT GATCC |
Predicted Small Protein
Name | ENST00000426459.1_smProtein_680:775 |
Length | 32 |
Molecular weight | 3618.1886 |
Aromaticity | 0.0645161290323 |
Instability index | 75.0806451613 |
Isoelectric point | 7.97808837891 |
Runs | 5 |
Runs residual | 0.0399865591398 |
Runs probability | 0.0340222575517 |
Amino acid sequence | MKKLFHTSSLTLSCRRFQDELQLAEPPQLLS |
Secondary structure | LLLEELLLLLLHHHHHHHHHHHHLLLLLLLL |
PRMN | - |
PiMo | - |