ENST00000425630.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000425630.1 |
Source |
Gencode19 |
Same with |
lnc-WDR37-1:1,NONHSAT010909 |
Classification |
intergenic |
Length |
2434 nt |
Genomic location |
chr10+:1205708..1210612 |
Exon number |
3 |
Exons |
1205708..1205930,1206493..1206577,1208487..1210612 |
Genome context |
|
Sequence |
000001 GTCGCACGCT TTGCGTAGAT GAGGGATGAC GCAGGCACAG GCCTGAGCGT CGCACGCTTT GCGTAGATGA GGGATGGCGC 000080
000081 CGGCGCAGGC CTGCGCGCCA CGCGCTTTAG GTGGATGAGG GATGGCGCAG GTGCAGGCCT GCGCGCCTCA CGCTTTATGT 000160 000161 ACATGAGGGA TGAGGCAGCA CAGGAATTGG CACAACCTGA AGTCAGCTCT GCAGCTTTCC AAGCTTCGTT CTGCGTGTCC 000240 000241 TGTACTCAAC AGTCATCTCA TGCTGCAGGG TGGCTGCGTG TGCTCCGTAC ATCACACCCA TATTTCAGGG AGAAGACTGC 000320 000321 ACATATAACA CAGCTCTGCA TGGAAAACCT TCCGCCTGGA GGGGTGGCTT CCTAGAGGTG TGGCGTTGCC CTCTGTCTTG 000400 000401 AACAGGCTGT GAGCCGTTTT GTCATTTGGG GTTTCTAGAT GCAAACAGCA GAAGCTGCTG GCCAATTACC AAAGGGAACG 000480 000481 TGCTGTTAGG ATATCAGGGC CTGGGAGCTG CAGCAATGTG GGCTGACAGC AGAGAGCTAA GGCACTTTCC GAGGTGACGA 000560 000561 GCTGGGCTGC TATGCTGGAG ACGGCTGGGC AGAAGCAGTT AGCAGGGCAT TTCCTTGTGT CCTTATCTCA AGAGTCACAG 000640 000641 TTTCAGGAGT GAGCATCTCA GAGGTCAGGG TTCATTCACA TGCCACCTCC CTTCTCACTG TGTCATTGGG GAGGGGCCGT 000720 000721 CTGGACCCTC TGGCTCCTGT GGCAAGAAAT GGTCCCATCA AGTCATCCAA GGGCCTGGAA GCCTCCCAAG GAAAGCAGGA 000800 000801 GGGCTGGGTG CTGAGCAGCG TCCAGCAGCA AAGGTAGGCT CCAGCCCCGC AGGTGTGGCT GCGCCATCCC AGGGAACGTG 000880 000881 CCCCAGCAAG TGCTGGTGCT GCTCTCACTA CAGGTGGGGT TGGTTTCACT GGACAGGTGG CACTTCCTCA CCTCTTGCCC 000960 000961 TCTGGACCCA CGGCAGGCAC TTTCCAGGGC ACATCACGTG GGTGTGCGGT CTGGCTGCTG GGTCCACGCG GGTTCTCAAT 001040 001041 CATGACCTGG CTTGCAAGCT CTTTCCACAG TTGGATAAAT GAAGCCGTTG GGGAAGTATC CGCAAACTCT TACAGTGAGT 001120 001121 ATGTGATAAT GACACACGCG TGGCCCTTCT AAGACCTCCG CTAGGCATTA TCAGTGACTG TGCTCGTGAG CGCTGACCTC 001200 001201 CGCTAGGCGT TATCAGGGAC TGTGCTCGTG AGCGCCGACC TCCGCTAGGC GTTATCAGGG ACTGTGCTCG TGAGCGCGGA 001280 001281 CCTCCGCTAG GCGATATCAG GGACTGTGCT CATGAGGGCG GACTTTCACC AGCCACGCTT CCGAGGAGTG GAGTCTTTCT 001360 001361 CAGCTCTGCC TCTCCAAGAT GACCATCTTG TGAAGACGAT GCGTTCTTTA TACACAAGTT CTGTGTGTGT GTGTGTGTGT 001440 001441 TCCACACACA GGACCAAAGT TGAGATAGGC GCACATTTTC TTGGTCCCAC TTGTGGCCCC AGTCGGCTGT CAGAAGTGGG 001520 001521 TGTGCTCCAC ATGTACCCAC CATGTCAGGG CACAGTGCTC ACATTTCACA CCTCAGCAGG TGCCTTGATG TTGACCAGAG 001600 001601 GCCCCAAAAT CATCTCTTTC TATGACTTCT AGATCTTAGA TTCCCAGGAA CTGGGAAATG CAGTCAGTAT CTTTTGGGTC 001680 001681 CAAGAAACTT TGTCAGAGCC CTTGTGGGAG AACCATAGAT TCTCACCAGA TAAACAGAAG AGCTTCGTGT TAGAGAAACC 001760 001761 CGCCTGTCTC CCCACATTCT CAGTTTTCTG GAGAGCAGCT GAAAGCCATC TGGGTGGAGA TTAAGAGCTC CAACCGTGTA 001840 001841 GCTTTGATGT ATCGGGCAAG TTGCTTAAGC TCTTTAATGC TGTTTCCTCA TTTATTGTGT GAGGCCAAAA ATACCCATTC 001920 001921 CTTAAAGTTG TGAGGATTAA AAACAGTAAT GAAAAGTGAG TGGCAAGTGC CGAGTACACA GTCAAGTACC TGATACTTTT 002000 002001 TAGTGTAAGG TAAGTAGCAA GAAAGCATGA AATTTATTTT CATTTACTCT TACTACATGT GGTAAACCAT CTATGCACAG 002080 002081 AGCACTGCAT TGGGTGCCAT GAATGACAGA ATAAGAGTAC CAGGTGCATG AAAAGCTTAA AAGACAAATG AGACAGAGCT 002160 002161 AGGCTGCAGA AGACTTAAAA AGTTGATGTA TTTAACTTTT AATGGACACA CTGTACATGT TTATGGGGTA CGATTTGTTG 002240 002241 TTTCCATGCA TATCTGTGTT GTGTAATGAT CCAATCAGGG TAGTGTGTGT GCCCATTTCC TCAAGGGTGG ATCATTATGT 002320 002321 GTATCATCGT GCATCATCAT GTATCATGCA TGTACCATCA TCATGCATCA TTGTGCATCA TCATGCCTGT ATCATTATGT 002400 002401 ATCACCTCAT GCATATATTA TAATGTATCA CCTC |
Predicted Small Protein
Name | ENST00000425630.1_smProtein_2201:2422 |
Length | 74 |
Molecular weight | 8463.1109 |
Aromaticity | 0.0958904109589 |
Instability index | 82.6356164384 |
Isoelectric point | 6.67559814453 |
Runs | 14 |
Runs residual | 0.0476358815731 |
Runs probability | 0.0612713553891 |
Amino acid sequence | MDTLYMFMGYDLLFPCISVLCNDPIRVVCVPISSRVDHYVYHRASSCIMHVPSSCIIVHH HACIIMYHLMHIL |
Secondary structure | LLEEEELLLLLLLLLEEEEELLLLEEEEEEEELLLLLEEEEELLLLEEEELLLLLEEEEH HHHHHHHHHHHHL |
PRMN | LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLHHHHHHHHH HHHHHHHHHLLLL |
PiMo | ooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiTTTTTTTTT TTTTTTTTToooo |