ENST00000425010.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000425010.1 |
Source |
Gencode19 |
Same with |
lnc-GDAP2-1:4,NONHSAT005490 |
Classification |
intergenic |
Length |
763 nt |
Genomic location |
chr1-:118146621..118148392 |
Exon number |
3 |
Exons |
118146621..118147021,118147411..118147558,118148179..118148392 |
Genome context |
|
Sequence |
000001 GACACCCACT TAACTTCGGA GTTAGTGGGA CACCTTTCTT TTTGCTTAGT ACGCTTTTCT GCTATTCCTG CCGCATAACT 000080
000081 CTCTCTTCCC CAGGCTTTTC CCATCTCCAT CCTATTCTCT CGCAGGCAGG TTTTTCTTCC GCCTCTCTGG GGATTTTCGC 000160 000161 GTTGGTTCTC CCTGCCCCCA GGAGTGAGGC GGGTAACGCC CACGCCTACC TCCGGTGCTG GGGGAAAAGA TTACTTCCCA 000240 000241 GATGCAGTAT TTACATCTCC TCCGCCCTAC TCTTCCAACC CTGCCTGAAA TAAGTGTGGT TCTCCTGTCT GTCAGACTAT 000320 000321 GAAGAGTTCT CAAATATGTC TTTCCCAGCG AGGGAGAGGA GATGCGTCTA TGAGATTCAT CCATATTGTT GTGTGTAACA 000400 000401 ATGGTCCATT CTTTTTCACT ACTGTGTATT ACTTCATTAT ATAAATATTC AACGATTTGT GTACTCATCC TACTGTTGGT 000480 000481 GGACATTTGA GTTGCTTCAT GTTTCTGCCT TTGATGAAGC TGCTGCAGAC ATTCTTACAC ATGTCTTTTG GTGGACATAG 000560 000561 CATTCATTTA TGTTGGATAT ATATATATAC CTAGGATTGG ATTCCTGGTT CATAGAGTGT TCACATATTA AACTTTAAAT 000640 000641 ACACTGCCAG TTTTTAAATT CGTATAACAA TTTAGGTTCC AACCAGTGAT ATGAGATTTC CGGTTGTTTC ACATCTTTGC 000720 000721 CAGTATTGGT ATTTTCAGTC TTTTTAATTT AAAAAGGGGG GGG |
Predicted Small Protein
Name | ENST00000425010.1_smProtein_569:637 |
Length | 23 |
Molecular weight | 2673.1514 |
Aromaticity | 0.181818181818 |
Instability index | 70.5 |
Isoelectric point | 4.53509521484 |
Runs | 6 |
Runs residual | 0.0363636363636 |
Runs probability | 0.0279838662192 |
Amino acid sequence | MLDIYIYLGLDSWFIECSHIKL |
Secondary structure | LLLLHHHHLLLLLEEHHHLLLL |
PRMN | - |
PiMo | - |