ENST00000423715.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000423715.1

Source

Gencode19

Same with

lnc-TRIM32-1:1,NONHSAT134447

Classification

intronic(AS)

Length

4996 nt

Genomic location

chr9+:119330728..119348607

Exon number

3

Exons

119330728..119331207,119341218..119341342,119344217..119348607

Genome context

Sequence
000001 CAGCCATTAA CCTGTCCATC TTCAGAACCT GAATCGGTAG CCAAATCTCA GCAGACAGAG CTACGTAATG CCAGATAAAT 000080
000081 CTTCTTGCTG AATGAGAGAC CCATCCTACC AGCATAAACA ACATTTGAAC ACTCTAGCCC CCAGCCTTAC CAGCCAGCTC 000160
000161 TCCATTCTCT ACACACAGAG TCTTTGTTGG GACACTCCAG GCCAGTTATT TCACCATCCT GAGTCTGGTC CCTCTCTGAG 000240
000241 GCCCAGGGAC ATATATTCAG TTCAGGTTTG AATTAAGGAA AGATACTACT ACCTTGATGG GGGATCAGGA CCACAGGACC 000320
000321 AAATTGAACC AGGCAAGACT GAAGGGGCCA AGGGATAGAG GATCCCCCTC CCGAAGGAGC CAACTGGAAG GCAACAATTG 000400
000401 GATGGCCTGT TAAAGAAGAA AGAAGCTTAG GACAGGGAGA ATGCCACTTT CCAGTATTAC AAAAATATCC TTTAGGCAAG 000480
000481 GAAGTAAATT CCGCACTTAG AGGAAGAGGG GTGGGCAAGA AGTGTCCACA TTCACAGGTA TTTGTTCTCA AGAAGTGAGG 000560
000561 CACCTGTGAT TCTCAAAATA GTAGAGTCGA AAGGAAAAAA AAAAGGGAGG TGGAAGGGGA GAAAAAGAAA CAAAAAACTA 000640
000641 CCTTTTGGGC AAAAGGAATG GAATGGCCAA GGCTACATTA TATACAAGCC AAAAGAACAA TTTCCATTGA CCTTGAGGAA 000720
000721 TGTGTAAGGG CAAAGTCATA AGCCGAGTTT AATTGATAAT TTCACTGTCC ATATGTGAAG AAAGAGCAAT GAACCACAAG 000800
000801 ACTTGGGCTC AAGGCCCAGC TCTGCCTCTA ACATGCTGCA GGACCTAGGA TCAGTCCTTT CCTGTCTCCA GGACTCAATT 000880
000881 TTCTTGCTAT ACAATGAAGG GATTGTACGG AGTGATCTAC ATGGACTAGC AGCTCTAAGG TTTGTAAGAC TGTATTATAA 000960
000961 ACTTTGAAGA GAATGAGGGA AGGGTCCAAG GATTCTCCTT TGCAGCTTTC CTAGAAAACC ATGTATCTTC CCCATGAAAG 001040
001041 GAAGAATACA AATAATGATG GTCAAATTTA CTGAATGCCT ATTATGTGCC ACATACTAAT GTCCATAGTT AAGAGTCAAA 001120
001121 CTAAGACCCA AAGCCAAAAG AAAGTATTGT ACCCAAGGCC ACATAACTAG TAAGTGATGT AACTGAGACT TCAGATATCA 001200
001201 AACTAACTCC AAGCCTGTGC TGAACACCGT TCTCTTCATC TACCCAGCCA CTTTTTGTTG TTATTGTACC TTTGTTTGTT 001280
001281 TATTCTTCCA TTCACTCATG CTACCAATGT TCCCTAAGTA CTTTCTCTGT GCACGAAACT GTGTAAACAC CAGTAAGCAT 001360
001361 GAGAAAAGAT CTATCAGGAA GTTCACAGTT GAGCAAAAGA AACAAGAAAC CGTGATCAGG AGGTTTAGAA AAGTTATCTT 001440
001441 TCTTTCCAAA GCACCATTCT GATTATGTTT ACGATCCTCA AAAGGCTTCA AAGGTTCCCC TTTTCCTACA GGATAAAGTC 001520
001521 CAAGTAGCTT AGCCTGTTTT CTTATCCCTC TGAGATCTGG TCCCTGTCTT GTCTCCTCTC GACATCATTC ATTCAACATT 001600
001601 TGTTAAGTGC TGACTATGTG CCAGACACTG TACCAGAGTC TTGGAATGCA ATGCTGAGTG GCACAGACTT AGGCCCTGCT 001680
001681 CTCCTGGAGC TTGCAGATAT TAATCAAATT ATCACACTGA TACAGAATTA GGCAATCCTT TAAACTTCCA GTGGTCCAGC 001760
001761 CCCACTTGAT TCAGGATCCT TCCTTCCAGC AGAGGTTCCC AGCCCAGGAA GTACATAGTC ATGCAGTTCT CCTTGGACTC 001840
001841 TTTAGATAAC CAGTTGATCT TTAATAAAGT GATTTGTCTA ATTAATCAAC CAGGAACATC TGCTTCTGAA GAGAGAACTT 001920
001921 TTCTTGGATC CCATGAATAA ATGTTTATTT TATTTTAACA TAGTTTTTCA ACAACAGGTT AAAATTGCTG GCTACACACT 002000
002001 ACTATGGAAT GCCATGATCT CCCTCCAGAG GAGTCTCTGC TTAAAGTTAA TTGCTTATTA CTTATGTTCC CAATTTAATC 002080
002081 CTAAATTTCA AGAAGGCAGA GTTTTTGCCT ATTCTTGCTC ATCATCGAAT ACCCAGCACT TTGCCCAGTG CTAGGCACGC 002160
002161 TGTTCTGTAC ATGTGCTGGT TAGGCATCCT TAACTACATA AAGCCTTAAT TCAAAATGAG ACTGTGGCAG ACATAGATCC 002240
002241 TTACCTTAAA AAAAAAAAAA AGTTTTCAGA AGGTGAAACA GAGCCTGAGA GGAAAAGCAA CTTTCCAAAA GCCACAGAGA 002320
002321 AAGTTGATAG CTTAATTGAA GTTGGAACCA AAGAGAACCA GAAGTCCTGA ACTCCTGCTA TACCACACCC ACTCACACAC 002400
002401 CTTGAGTCTG AAATGGCAAG GAGGACAGGT CCTCAAAGCA AAAAGGTGCA TAACTCGAGG CAGACAGTCT CCCATCCCAA 002480
002481 GCTTCTGTTG TACATGAATT TACATCAGAG AGTCACTGAG CCGACTCTTT TAGATGTAGA AGAGACCATC TTCATGGGAG 002560
002561 AAACTCTTGC CTGCCCCCAA ACAAGACCTC TGACTGAGGA ATATATTCAA TCACTCCCTC TAACCCAAAC TCCCCAAAAC 002640
002641 ACTATTTCCT ATTATGTCTC CATAACCAAA TTCAACCCAC CCAAATCTCA AGATTAGATC TGTGAGCTCA CAAAGGCCTA 002720
002721 ATCACCCAAT TAAGAGGAGG AAAACCTGAT CCTTTCTAAA CAAAGTGAAA TGTGAGGTAA CCCAGTTGCT GAGATTAAGT 002800
002801 CTCACTCAGG AAGAAGCAAA GGAGCTAGGA GAGAATGGGT GGGTCATTCA TTAAACGGAA TTTTCCAGGA AATTTGAGTG 002880
002881 ATGTGTCTCC CCAGATCTCA GTGTTCCAGG CCCCAGAACA ATGCTGGAGG CAAGGCCCTG GCTTTAGGAG GACCATGGGG 002960
002961 GTGAAGACAG CATTACTCTC CTTGCCCGAA ATCCCTAGGT ACTATCTGGG GCATTCTGAT CTCTCACTGG ACAAATGGCC 003040
003041 TGCTATCAAT GATGAACTTT ATACTCAGGC CCAAAAAATT CCAAGAGAAA AGTGCTTAGA AAGATAAACT ATAGCCCACT 003120
003121 ACCATCATTT CAATAGACTC AGAAAATTCA ACATCCATTT CAAATGGAAA CAAAACAAAG CTTTTGCAGC AAACTAGAAA 003200
003201 TAGAAGATAC CTCCTTCCAT GTAATAAAGG GCATATACCA TAAAAAAATA CAACTAGCAT TATACTTAAT GGTGAAAGAC 003280
003281 TAAACGTCTA AAATTAGAAA AAAGGCAAAG ATGTCTGTTC TTACCACTTC TGTTCATATA GTACTAAAAG TCCTAGCTAC 003360
003361 AGCAATTAGA CAAGTAATAA ATAAATAAAA GTCATCCAAA TTGGAAAGGA AGAAGTATAA TTGTCTCTGT TTGCAGATGA 003440
003441 CATGATCATA CATATAGAAC ACTTTAGGAA GAACTGAGTT TTCCAACACT GGAGGCATGT TACCAGTGCA TGTTCAAGGG 003520
003521 CATACAAAAA TGTTAAAGAG AAAGCAAGAC TAGATGATCT CTTAAGATCC TTCCAACTCT GATACAGAAG AGGTACTCCA 003600
003601 AGACAAAGAA TGGAGTATGC CAAATAAACG GTAGAGAGAA TGAGTGAGTG CACTATGTTG AGAAGGAAAA GACTTTGTGC 003680
003681 TGAAAGGGTC AAGAAGCCTT TGTGGAAGAA GCAACACTTG AGTAGTTTTG ATCTAGACTA TGGTCTATAA GAACAAGCAC 003760
003761 TGTGCTGGGC ATAAGACTGA CCTGGTTTTA TATATATATA AAAATTATCT GGTTCAGGAA TTGAAAGACA GTTTGGCATA 003840
003841 CCGTTAAGGG CAAGGACTCA GATAGACCTG GATTCAAATC CCAATTCTGC CTTAGACAAG TGATTTCTCC TGACAGAGCA 003920
003921 TCAATTTTCT CCTCTTCAAT ATGAGAATAA CAACTTCTAG CTTATAGAAT TGCTGGAAGA ATTTGTGAAA ATGTATTTGA 004000
004001 TGTTCCCAGT AGAGTGCCTG TCATACAGAT GTGTGCAGTA TGTAATTGGT AGTGATTACT CTGAGAAGGT GTTTGGACTT 004080
004081 TGGTTAATTA CTTACTGATT TCTGGAATGA GACCTTTATG ACTGATACAA AAATGGACAC ATAAACCAAT GGAACAGAAT 004160
004161 AGAGAACTCA GAAATAAAAC CATACACCCA AGCCATCTGG TCTTCTACAA AGTTGACAAA AGTAAGAAAT GAAGAAAGGA 004240
004241 CTCCTTATTC AGTAAATGGT GCTGGGATAG CTGGCTAGCC ACATGCAGAA GAATAAAACT GGGCCCTTAC CTTTCACCAT 004320
004321 ATACAAAAAT TAACTCAAGA TGGATTAAAG ATTTAAATTT AAGTCCTCCA ACTATAAGAA TCCTAGAAGA AAACCTATAA 004400
004401 AACACCATTC TCAATGTCAG CCTTGGGAAA GAATTTATGA TTAAGTCTTC AAATGCAGCT GCAACAAAAA CAAAAATTGA 004480
004481 CAGTGGGATC TAATTAAAGA GCTTTCGCAC AGCAAAAGAA ATTATCAATA AACAGACAAC CTACAGAATG AAAGAAAATA 004560
004561 TTCAAACTAT GCATCCAACA GAAGTCTAAT ATTCAGACTC TGTAAGAAAC TTAATAAGCA AAAAACAAAT AACTCCAATA 004640
004641 AAAAAATGGG CAAAAGACAT TAACAGACAC TTCTGAAAAG AAGACACTCA AGCAGCCAAT AAACATGAAA AACTGCTCCA 004720
004721 CATTACTAGT CATCAGAGAA ACAGAAATCA AAACCACAAT TGCGTGCTAT CTCACACTAG TCAGAATGGC TATTATCAAA 004800
004801 AAGTCAAAAA ACAACAGATG CTGATGAGGC TGTACAGAAA GGGGAACACT TATTCACTGT TGGTGAGAAT GTAAATTGGT 004880
004881 TAAGCCACTG TGGAAAGTAG TTTGGAGATT TCTCAAAGAA CTTAGAATTA TCATTCAACC CAGCAATCCC ATTACTGGGT 004960
004961 ATATATCCAA AAGAAAATAA ATCCTTCTAC AAAAAA
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Predicted Small Protein

Name ENST00000423715.1_smProtein_2834:3106
Length 91
Molecular weight 10280.6755
Aromaticity 0.1
Instability index 43.0888888889
Isoelectric point 9.09698486328
Runs 15
Runs residual 0.0268077601411
Runs probability 0.0387622917035
Amino acid sequence MGGSFIKRNFPGNLSDVSPQISVFQAPEQCWRQGPGFRRTMGVKTALLSLPEIPRYYLGH
SDLSLDKWPAINDELYTQAQKIPREKCLER
Secondary structure LLLEEEELLLLLLLLLLLLLEEEELLLHHHHHLLLLLEEELLHHHHHHLLLLLLLLLLLL
LLLLLLLLLLLLHHHHHHHHHLLHHHHLLL
PRMN -
PiMo -