ENST00000422129.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000422129.2 |
Source |
Gencode19 |
Same with |
NONHSAT005667 |
Classification |
intergenic |
Length |
729 nt |
Genomic location |
chr1-:143118704..143195711 |
Exon number |
3 |
Exons |
143118704..143119179,143194122..143194342,143195680..143195711 |
Genome context |
|
Sequence |
000001 GCTAATAGTT CCATGTCAAA AAAATTAACT AAATCGAATA AGAAAATAGC AATGATCAGT ATCAGCTCTT TATGGAGAAA 000080
000081 GAGCAGGTGA AATATTTTCT CAGCACTCTT CCTACAAGGC GAGGTCGAGA GTCACCTTGT GTTGAAAATC TTACTAGTAT 000160 000161 AGGACTCAAC AGAAAATATA TTCCCCAAAT GCCCGTAAGA ATTCCTACTT CAAACCTCAG ACTTCAAATA ACTGCCAGAA 000240 000241 CTACTTGACT GAGACACCCA TAAACTCAGA AAATACAGTG TAAAACAAAG TGAAGAACAA ATAAACAACT CACCAGAGAT 000320 000321 TTATTCGTTT CTTGTTGCTC TTGGAAACAC CCAGAGGACA CTGGAAACAT AGCTGGGATA GAAGGCAAAT GACGTGGATT 000400 000401 AAGGAGAGAA CTGGTGTGGT TTGGTCCCAG ATTCTTCTGC CCAACACTCT AGACACATTA CCTGGGAAAG CCCTCCTCCC 000480 000481 TCCTGAAAAA GAAAAACTTC CCCAGGGGAG AAGAATCCTT CACGCCTCAT TAGGGGCAGC AAAGACTCAA GTTAAGATAA 000560 000561 GATACATCTA CAAGTACATT AATTGGTAGA CATTAGATGC ACAATTTATT TTTGAATAAA AATATATATT ACCTACTAAT 000640 000641 TTAGTAACAA TATTATCTAA AGATATAATC TAATAATTTA ATACAAAGAA ACATTATAAG TTCACTAAAA TAAATGTTAT 000720 000721 AGAAATATA |
Predicted Small Protein
Name | ENST00000422129.2_smProtein_71:247 |
Length | 59 |
Molecular weight | 6733.8006 |
Aromaticity | 0.051724137931 |
Instability index | 53.5465517241 |
Isoelectric point | 10.506652832 |
Runs | 11 |
Runs residual | 0.0330617658204 |
Runs probability | 0.0364375070258 |
Amino acid sequence | MEKEQVKYFLSTLPTRRGRESPCVENLTSIGLNRKYIPQMPVRIPTSNLRLQITARTT |
Secondary structure | LLHHHHHHLLLLLLLLLLLLLLLLLLLEELLLLEEEELLLLEEELLLLLEEEEEEELL |
PRMN | - |
PiMo | - |