ENST00000421481.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000421481.1 |
Source |
Gencode19 |
Same with |
lnc-ADD3-3:2,NONHSAT016308 |
Classification |
intergenic |
Length |
480 nt |
Genomic location |
chr10+:110470276..110599121 |
Exon number |
3 |
Exons |
110470276..110470293,110521327..110521377,110598711..110599121 |
Genome context |
|
Sequence |
000001 TCTCAGAGTC CATGACAGCT CTGTCCTCTT CAATAATGGT GCATGGTGAC CCTCAATATG AGATACAAGC ATCTGTTATC 000080
000081 TGGAGACTGG CTGCTCTCAG TGAAAAAAGA AGGAGTACTG CTAATAGGCT TTCACCTCAC AGCCTGAATG CCAGGCCACC 000160 000161 ACACAAGAAC TGAAGAGGCC AGGCTCCTCC CCATTCTCCC AGTGTGCAGG TGGGCCCCTC ATCCATTGCA GGCATGTGCA 000240 000241 GAAAAGACCC TGGGCAGGTT CCCTCATCTG CACAAAAGCA TCTGATGTAA ACACTTGTGG GGTGAGTCGG AGATTCTCTG 000320 000321 GGGACCCTCC CTCATCTGAC TCCTGCATCT ATCACTACCA TTACCTCAAA AACAATAAAA AAGTTAAATT GGCATTTTTT 000400 000401 TTTAACCTAA AGGCTAGTGT ATCTGGCAAC ATACAAGATA CATACCTCTC ATAGAAGATT AAAAGCTTTT TCGTACCAGG 000480 |
Predicted Small Protein
Name | ENST00000421481.1_smProtein_11:172 |
Length | 54 |
Molecular weight | 5924.6915 |
Aromaticity | 0.0377358490566 |
Instability index | 67.9113207547 |
Isoelectric point | 10.8779907227 |
Runs | 7 |
Runs residual | 0.0281868384722 |
Runs probability | 0.0329699447347 |
Amino acid sequence | MTALSSSIMVHGDPQYEIQASVIWRLAALSEKRRSTANRLSPHSLNARPPHKN |
Secondary structure | LLLLLLEEEELLLLHHHHHHHHHHHHHHHHHLHHHHHLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |