ENST00000421480.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000421480.2 |
Source |
Gencode19 |
Same with |
lnc-CUBN-1:1,NONHSAT011599 |
Classification |
intronic(S) |
Length |
697 nt |
Genomic location |
chr10-:16763351..16790376 |
Exon number |
3 |
Exons |
16763351..16763718,16765087..16765207,16790169..16790376 |
Genome context |
|
Sequence |
000001 AGAAGACATG GTGACAGAAG CAAGAGGCTG GAGTCACTCA TGGAAGGGGC CACGAGCCGA GAAGTACAGG CAGCCTCCAG 000080
000081 AAACTGGAAA GGCATGCAGC CGGATGTCCC CCCTGCAATC CCGAAGCCTC CAGAAGGAAT GCAGCTTTAT TGGCACCTCA 000160 000161 ATTTTAGCTC CATAAAATCC AGTTTTTGGA CTTGTGCACT CTACAACATT CACCAAAATG GTACCCACAG TTGAAAACAC 000240 000241 TCATAAGAAT AATGAAGTCA CATTGCGATG GACTTTGCTC TCCCAGCTCA AATTATGTGC CAACTAATAC AGCAAATCGT 000320 000321 ATGATATATT TATCAAGTGA TTTGCCACCC ACGTCTGTCC CACTCAGAAA AGCCTATTGC AATGCAAGAG AATGAGCGTG 000400 000401 ATACCATTAA AGGGTTGATC TTGGATCTAG TCTAATTTGT GAAGAACATT TTATAAGTCA CTCAACCATC ATGAGTAACA 000480 000481 AATCGCTGGG GAAGTGGCTT AGGCCTCCCA GCCACATGCC AGGAAGCCTG TGTTTGGCAA TGACTGTTGC TCTGTACAGA 000560 000561 ATGGCTCAAG TGTTCTATTG GAAGCAGTTG GACCTTGTGG CTTTCATGCT GTCACCCTTG TATTATTTCT TGGTGTGTCC 000640 000641 AGGTAAAGCT GGAGCTCCTT AGCCCAGCCA GAAAGGCAGC TCATGGTGCA GCCCCTG |
Predicted Small Protein
Name | ENST00000421480.2_smProtein_470:661 |
Length | 64 |
Molecular weight | 7096.5176 |
Aromaticity | 0.142857142857 |
Instability index | 60.7001587302 |
Isoelectric point | 9.62603759766 |
Runs | 7 |
Runs residual | 0.0338516358925 |
Runs probability | 0.0353546824136 |
Amino acid sequence | MSNKSLGKWLRPPSHMPGSLCLAMTVALYRMAQVFYWKQLDLVAFMLSPLYYFLVCPGKA GAP |
Secondary structure | LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLHHHHHHLLLEEEEELLLLL LLL |
PRMN | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHL LLL |
PiMo | oooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiTTTTTTTTTTTTTTTTTTo ooo |