ENST00000420503.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000420503.1

Source

Gencode19

Same with

lnc-CELA3A-1:2,NONHSAT001464

Classification

intergenic

Length

771 nt

Genomic location

chr1+:22352004..22357293

Exon number

3

Exons

22352004..22352132,22353907..22354027,22356773..22357293

Genome context

Sequence
000001 GGTTCCCGCG CGGCGCTCCA AAGCTCGGGG AGTGGTGGTC TCCCTTTCCT GGAGTCATTT GTGGGAGTTA GGGTCTTATC 000080
000081 CTGATCTTTC CTCGTCCCCC GCTCCCCCGT CCTCCGAGGT GGCAGCTGCA TCGGGGGTCA TACTACACAT CGATCGGGAC 000160
000161 CTTAGTCATG TTGTGATATG GACAGCTTTC TTACCAGTAC TCATAAGCCT GCTTCATTTT TTACGTGGCG GCACCACTGA 000240
000241 GTGGTTGACG AAGTCTGGAA CGTTTTTTCT TAGAGTTCCA GAATTGAGAC TGAAGTGTAC CCAGAGACAC AAAGAAATAC 000320
000321 AGAAGTCCAG AATGATCAAA TGAGATCACT ACCCAATGAA ATGATGGGCC GAGGAGCCAG AAGTTGTCCT ACTACCTGCT 000400
000401 TTCCAGGTCC AGATTCCACG AGAGCCTTCT GGGCTCCCAC CAGAGACCCT CAGTGAAGAC TCTGTTGAAG ACTTTAAGAC 000480
000481 CATGCTAGAA AGCCTCCCGG CAGAGGTTCA GGAAGTTCTG CTATGAGGAT GCAGCTGGCC CCAGGGATGT CCTCAGGCAT 000560
000561 CTCTAGGACC TTGCTGGACG GTGGTGGCTG AGACCTGATA TCCACACAAA GGAGCAGACT GTGGAAATGC TGGTGCAGGA 000640
000641 GCAATTCCAG GCTGTCCTGC CCGAGGAGCT CAGAGCTCAA GCACAGAGAT GTCAGCCTGG AATCAGAATC ACTGGCTAAG 000720
000721 TCTTGCTGCT TGCTTCTTGC TCAGCCTGCA TATGAGAAGT CAACCAAGCA T
[back to top]

Predicted Small Protein

Name ENST00000420503.1_smProtein_626:718
Length 31
Molecular weight 3410.9229
Aromaticity 0.0333333333333
Instability index 47.74
Isoelectric point 5.98406982422
Runs 7
Runs residual 0.0310810810811
Runs probability 0.0292351174704
Amino acid sequence MLVQEQFQAVLPEELRAQAQRCQPGIRITG
Secondary structure LLHHHHHHHHLHHHHHHHHHHHLLLLEELL
PRMN -
PiMo -