ENST00000420293.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000420293.1 |
Source |
Gencode19 |
Same with |
lnc-MOCS1-1:2,NONHSAT112441 |
Classification |
antisense |
Length |
440 nt |
Genomic location |
chr6-:39856650..39865156 |
Exon number |
3 |
Exons |
39856650..39856831,39859082..39859155,39864973..39865156 |
Genome context |
|
Sequence |
000001 CCAGCCATCA TCAAGCCCAG AGTAGACCCC AAAAGAGGAA AGTAAGACAA GAATGAGGGT CATCATGGGG AGAAGGAAGT 000080
000081 CTTGGAGAGA ACCCTCACTT GACTTTGGCA GCTTCTGGAA GATGTTGCAG CTCTGAAGGC ATGTTTAGAA TATCAGGAAA 000160 000161 ATGCTTCTCC AGGATCATGA TCAGGAGGTC AATGTCACTC TTCTCTGGGA TGAACTTGAG GAGCTGCAAA GAGCAGGCGC 000240 000241 AAGTCACACA AGCAACTGGT TTCCCAAAGG ATCCAAAAAA CTGAGAGGGA AGAGATTTGG GGAAGATGTC ACTTTTCCTC 000320 000321 ATCTGACTTT GCCTTGGAGT CAGATGGGAG AATGACTCCT GGAGAACACT TAGCCTTTTC CAGCTTTCCC CAAGAAAGGC 000400 000401 TGGCCCAGGG AGGCTTCTAT AAACCTTCTC CCTAACTCTT |
Predicted Small Protein
Name | ENST00000420293.1_smProtein_140:283 |
Length | 48 |
Molecular weight | 5385.3229 |
Aromaticity | 0.0851063829787 |
Instability index | 64.7212765957 |
Isoelectric point | 10.9595336914 |
Runs | 10 |
Runs residual | 0.0464893617021 |
Runs probability | 0.0341989047871 |
Amino acid sequence | MFRISGKCFSRIMIRRSMSLFSGMNLRSCKEQAQVTQATGFPKDPKN |
Secondary structure | LEEEELLEELEEEEHHHLLLLLLLLHHHHHHHHHHHHHLLLLLLLLL |
PRMN | - |
PiMo | - |