ENST00000419813.1
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000419813.1 |
Source |
Gencode19 |
Same with |
lnc-FAM126A-2:1 |
Classification |
intergenic |
Length |
2564 nt |
Genomic location |
chr7-:23140847..23145322 |
Exon number |
3 |
Exons |
23140847..23143197,23143869..23143936,23145178..23145322 |
Genome context |
|
Sequence |
000001 CACAGTGGCG CGCCGTTCCG AGCAATGAGA CTGCAGGCAC AGGTGCGGCC GGATTCCCTG TCGCTGTCCC GCGCTGAGTG 000080
000081 AATTTTGCCT CGGAGCTGGT CCGAGGTCGC GCCTGCTCTT TTGTGTGCCC AAGGCAGATT TCCAGAAGTA GAAATCTGTC 000160 000161 TTCTAACTCT AAGGCCTTGG GAGATGAAGG ATCCGTGATT CAAAGGCAGA AATAGATGGA GTCTTGCTGT GTTCTCCAGG 000240 000241 ATTGAGTACA GTGGCTTATT CACAGATGTG ATCATACTAC ACTACAGCCT CAAACTCCCG GGGTCAAGCA GTCCTCCTGC 000320 000321 TTCAGCCTCC TGAGGAGCTG GGACTACAGG CCCACATCAC CATGCCCACT AGATTCACAG TCATTTTGCT TGTGGAAGGT 000400 000401 CTTGCCTCAA TGTTGATAGG TGCTGACTGA TCAGGGTCAG GTTGCTGACT GATCAGAATG GTAGTTTCTG AATGTTGGGA 000480 000481 ATGGCTATGG CAATTTCTTA AAATAAGACA ACAATGAAGT TTGCTGCATT GATTGACTCC CTTTCACAAA GGATTTCTCC 000560 000561 ATATCATGCA ATGCTGTTTG ATAGCATTTT ACCCATAGTA GAACTTCTTT CAAAATTGGA GTCAATTCTC TCAAACCTTG 000640 000641 TCTCTGCTTG GTCAACTAAG TTTATGCACT ATTCCACATC CTTTGTTGTC ATTTCAACAA TATTTACAGA GTCTTCACCA 000720 000721 TGAATAGATT CCTTTTCAAA CAACCACTTT CTTTGCTCAG CCATAAGAAG CAACTCTTCA CCCATTCAAG TTTTATCATG 000800 000801 AGATTGCAGC AATTCAGTCA CATCAAATTC CACTTCTAAT TCTAGTTGTT TTTCTATTTC CACCACATCT GCAGGTACTT 000880 000881 TCTCCACAGA AATTTCAAAC CTCTCAAAGT CATCCGTGAG GGTTGGAATC AACTTCCAAA TTTCTGTGAA TGTTGATATT 000960 000961 TTGACCTCCT CCTAATCACA AATGTTCTTA ATGGCATCTA GAATGGTGAA TCTTTTCCAG AAGGTTTTCT ATGTGCTTTG 001040 001041 CCCAGTTCCA TCAGAAGAAT CACTGTCTGT GGTAGCTCTA GCCTTATTAA ATGTATATTT TAAATAATAA CACCTAAAAA 001120 001121 TCAAAATGAC TCCTTGATCC ATGGGCTGTA GAATAGACAT TGTGTTAGCA GTCATGAAAA CAAGATTAAT CTCCTCATAT 001200 001201 AGCACCATTA TAGCTCTTGG GTGACCACGT GCATTGTCAA TGACCAGTAA TATTTTGAAA GGACACCTTT TTTTTTGAGC 001280 001281 AGTAGGTCTC AACAGTGGAC TTAAAATATT CAGAAAGCTG TGTTGTAAAC AGATGTGCTG CCAGCTAGGT ATCGTTGTTC 001360 001361 CATTTATAGA GCACTGGTAG AGCAGATTTA GCATAATTTG TCAGGACCCT AGGATTTTTG GAATGGTAAA TGGGCACTGG 001440 001441 CTTCAACTTC AAGTAACCAA CTGCATTAAC TCCTAACAAG AAGAGTCAGC CTGTCCTTGA AAGTATGAAA ACAGGCATGG 001520 001521 ACTTCTCCTC TCTAGCTATG AAAGTCTTAG ATGGCATCTT CTTCCAATAG AAGTTGTTTC ATGTACATTG AAAATCTGTT 001600 001601 GTTTGGTGTA GCCACCCTCT TCGATGATCT TAGCTAGATC TTCTGGATAA CTTGCTACAG TTTCTACATC AGCACTTGTT 001680 001681 GCCTTACCTT ACACTTTCAT GTTAAGGAGA TAGCTTCTTT CCTTAAACCA CAGGAACGAA CCTCTGCTAT CTTCTAGATT 001760 001761 TTCTTGGGCA ACTTCCTTAC TTCTTTCAGC TTTCATAGAA CTGAATAGTG TTAGGATCTT GCTCTGGGTT AGGTTTTGGC 001840 001841 TTAAGGGAAT GTGGTAGCTG GTTTGATTTA TTTAGACCAC TAAAACTTTC TTCATATCAG CATTAAGGCT GGTTTGCTTT 001920 001921 ATTATCATTT ATGTGTTCAC TGGAGTAGCA CTTTAAATTT CCTCCAAGCT TGTTTGCTTT TCACTCACAG TGTGGCTGTT 002000 002001 TGGTGCCAAG AGGCCTAGCT TCCCAGTCTT GGCTTTCAAC ATGCCTTCCT CACTAAGCAT AGTCATTTCT AGCTATTTAT 002080 002081 TTAAAGTTAG AGATGTGCAA CTCTTCTTTC ACTTGAACAC TTAGAGGCTA TTGTAGGGTT ATTACTTGGC TTAATTGCAA 002160 002161 TATTGTTGTG TCTGGAGGAA TAGAGAGGCC TGGGGACACA AAGAGAAATG GGGAACAGCT GGTCACTGGA GCAGTGAGAA 002240 002241 CACACGCAAC ATTTATTGAT TAAATTCGCT GTTTTATGGG CTCGGTTCAT GGTGCTCCAA AACAATTATA ATAGTAACAT 002320 002321 CAAACATCAC TGTTCACAGG TCACCATAAC AGATATAATG ATAATGATAA TAATAATAAT GTTTGAAATA TTGCAAGAAT 002400 002401 TACCAAAATG TGACTCAGAG AAACAATAAA GTGAGCACAT GCTGTTGGAA AAATGGTACT GATAGACTTG ATCCATGCAG 002480 002481 GGTTGCCACA AACGATTAAT TTGCAAAAAA AACAAACAAA AGAACATGCA GTATCTGTGA AGCACAATAA AGCATACTGC 002560 002561 AAAT |
Predicted Small Protein
Name | ENST00000419813.1_smProtein_2288:2428 |
Length | 47 |
Molecular weight | 5421.3797 |
Aromaticity | 0.0434782608696 |
Instability index | 66.8130434783 |
Isoelectric point | 5.37628173828 |
Runs | 8 |
Runs residual | 0.0125517598344 |
Runs probability | 0.0307255785196 |
Amino acid sequence | MVLQNNYNSNIKHHCSQVTITDIMIMIIIIMFEILQELPKCDSEKQ |
Secondary structure | LEEELLLLLLHHHLLLLEEHHHHHHHHHHHHHHHHHHLLLLLLLLL |
PRMN | - |
PiMo | - |