ENST00000419813.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000419813.1

Source

Gencode19

Same with

lnc-FAM126A-2:1

Classification

intergenic

Length

2564 nt

Genomic location

chr7-:23140847..23145322

Exon number

3

Exons

23140847..23143197,23143869..23143936,23145178..23145322

Genome context

Sequence
000001 CACAGTGGCG CGCCGTTCCG AGCAATGAGA CTGCAGGCAC AGGTGCGGCC GGATTCCCTG TCGCTGTCCC GCGCTGAGTG 000080
000081 AATTTTGCCT CGGAGCTGGT CCGAGGTCGC GCCTGCTCTT TTGTGTGCCC AAGGCAGATT TCCAGAAGTA GAAATCTGTC 000160
000161 TTCTAACTCT AAGGCCTTGG GAGATGAAGG ATCCGTGATT CAAAGGCAGA AATAGATGGA GTCTTGCTGT GTTCTCCAGG 000240
000241 ATTGAGTACA GTGGCTTATT CACAGATGTG ATCATACTAC ACTACAGCCT CAAACTCCCG GGGTCAAGCA GTCCTCCTGC 000320
000321 TTCAGCCTCC TGAGGAGCTG GGACTACAGG CCCACATCAC CATGCCCACT AGATTCACAG TCATTTTGCT TGTGGAAGGT 000400
000401 CTTGCCTCAA TGTTGATAGG TGCTGACTGA TCAGGGTCAG GTTGCTGACT GATCAGAATG GTAGTTTCTG AATGTTGGGA 000480
000481 ATGGCTATGG CAATTTCTTA AAATAAGACA ACAATGAAGT TTGCTGCATT GATTGACTCC CTTTCACAAA GGATTTCTCC 000560
000561 ATATCATGCA ATGCTGTTTG ATAGCATTTT ACCCATAGTA GAACTTCTTT CAAAATTGGA GTCAATTCTC TCAAACCTTG 000640
000641 TCTCTGCTTG GTCAACTAAG TTTATGCACT ATTCCACATC CTTTGTTGTC ATTTCAACAA TATTTACAGA GTCTTCACCA 000720
000721 TGAATAGATT CCTTTTCAAA CAACCACTTT CTTTGCTCAG CCATAAGAAG CAACTCTTCA CCCATTCAAG TTTTATCATG 000800
000801 AGATTGCAGC AATTCAGTCA CATCAAATTC CACTTCTAAT TCTAGTTGTT TTTCTATTTC CACCACATCT GCAGGTACTT 000880
000881 TCTCCACAGA AATTTCAAAC CTCTCAAAGT CATCCGTGAG GGTTGGAATC AACTTCCAAA TTTCTGTGAA TGTTGATATT 000960
000961 TTGACCTCCT CCTAATCACA AATGTTCTTA ATGGCATCTA GAATGGTGAA TCTTTTCCAG AAGGTTTTCT ATGTGCTTTG 001040
001041 CCCAGTTCCA TCAGAAGAAT CACTGTCTGT GGTAGCTCTA GCCTTATTAA ATGTATATTT TAAATAATAA CACCTAAAAA 001120
001121 TCAAAATGAC TCCTTGATCC ATGGGCTGTA GAATAGACAT TGTGTTAGCA GTCATGAAAA CAAGATTAAT CTCCTCATAT 001200
001201 AGCACCATTA TAGCTCTTGG GTGACCACGT GCATTGTCAA TGACCAGTAA TATTTTGAAA GGACACCTTT TTTTTTGAGC 001280
001281 AGTAGGTCTC AACAGTGGAC TTAAAATATT CAGAAAGCTG TGTTGTAAAC AGATGTGCTG CCAGCTAGGT ATCGTTGTTC 001360
001361 CATTTATAGA GCACTGGTAG AGCAGATTTA GCATAATTTG TCAGGACCCT AGGATTTTTG GAATGGTAAA TGGGCACTGG 001440
001441 CTTCAACTTC AAGTAACCAA CTGCATTAAC TCCTAACAAG AAGAGTCAGC CTGTCCTTGA AAGTATGAAA ACAGGCATGG 001520
001521 ACTTCTCCTC TCTAGCTATG AAAGTCTTAG ATGGCATCTT CTTCCAATAG AAGTTGTTTC ATGTACATTG AAAATCTGTT 001600
001601 GTTTGGTGTA GCCACCCTCT TCGATGATCT TAGCTAGATC TTCTGGATAA CTTGCTACAG TTTCTACATC AGCACTTGTT 001680
001681 GCCTTACCTT ACACTTTCAT GTTAAGGAGA TAGCTTCTTT CCTTAAACCA CAGGAACGAA CCTCTGCTAT CTTCTAGATT 001760
001761 TTCTTGGGCA ACTTCCTTAC TTCTTTCAGC TTTCATAGAA CTGAATAGTG TTAGGATCTT GCTCTGGGTT AGGTTTTGGC 001840
001841 TTAAGGGAAT GTGGTAGCTG GTTTGATTTA TTTAGACCAC TAAAACTTTC TTCATATCAG CATTAAGGCT GGTTTGCTTT 001920
001921 ATTATCATTT ATGTGTTCAC TGGAGTAGCA CTTTAAATTT CCTCCAAGCT TGTTTGCTTT TCACTCACAG TGTGGCTGTT 002000
002001 TGGTGCCAAG AGGCCTAGCT TCCCAGTCTT GGCTTTCAAC ATGCCTTCCT CACTAAGCAT AGTCATTTCT AGCTATTTAT 002080
002081 TTAAAGTTAG AGATGTGCAA CTCTTCTTTC ACTTGAACAC TTAGAGGCTA TTGTAGGGTT ATTACTTGGC TTAATTGCAA 002160
002161 TATTGTTGTG TCTGGAGGAA TAGAGAGGCC TGGGGACACA AAGAGAAATG GGGAACAGCT GGTCACTGGA GCAGTGAGAA 002240
002241 CACACGCAAC ATTTATTGAT TAAATTCGCT GTTTTATGGG CTCGGTTCAT GGTGCTCCAA AACAATTATA ATAGTAACAT 002320
002321 CAAACATCAC TGTTCACAGG TCACCATAAC AGATATAATG ATAATGATAA TAATAATAAT GTTTGAAATA TTGCAAGAAT 002400
002401 TACCAAAATG TGACTCAGAG AAACAATAAA GTGAGCACAT GCTGTTGGAA AAATGGTACT GATAGACTTG ATCCATGCAG 002480
002481 GGTTGCCACA AACGATTAAT TTGCAAAAAA AACAAACAAA AGAACATGCA GTATCTGTGA AGCACAATAA AGCATACTGC 002560
002561 AAAT
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Predicted Small Protein

Name ENST00000419813.1_smProtein_2288:2428
Length 47
Molecular weight 5421.3797
Aromaticity 0.0434782608696
Instability index 66.8130434783
Isoelectric point 5.37628173828
Runs 8
Runs residual 0.0125517598344
Runs probability 0.0307255785196
Amino acid sequence MVLQNNYNSNIKHHCSQVTITDIMIMIIIIMFEILQELPKCDSEKQ
Secondary structure LEEELLLLLLHHHLLLLEEHHHHHHHHHHHHHHHHHHLLLLLLLLL
PRMN -
PiMo -