ENST00000419199.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000419199.1 |
Source |
Gencode19 |
Same with |
lnc-LAMP1-1:1,NONHSAT035341 |
Classification |
antisense |
Length |
867 nt |
Genomic location |
chr13+:114005988..114010049 |
Exon number |
2 |
Exons |
114005988..114006285,114009481..114010049 |
Genome context |
|
Sequence |
000001 CGCTGACCAA GTGCCAGGCC TCACTGAAGC TGACCTCCGC GTTAACCCTG GACACAAGCC GAGCAGGAAG GATAATGCCG 000080
000081 GCTTGACAAC TCCACTGGTT TCTGCTCCCA CTGGCCCTAC CTCTGTTAGA GGTGTTCGCC AGGCACCCCA TGCGGTCACC 000160 000161 AGCAGACAGC CGCTTTCTGC ACAAGTTCCA AGATGGACTC ACAGCAGTCC CCGCCAGCCA TGACGCTGAG ATGGGTGTAC 000240 000241 ACCCAGCTCT GGAGGAACCC AACCGCCTGT GGTCTCTCCA CAACGGCTGC AAAATACTGC TTCAGTTTTG ATTCTTTCAT 000320 000321 GGAGGAAGAC GTAACTTCAA GTTAAAAGCA GCAGGCGCAC CGCTCACCCC TGGACGCTGA GGCTAGACAC TGGGTGGAAA 000400 000401 CCGGTTCCTT CCGGCCCCCG GGCCCTGCAC CAGAGCTCGA CCCCCACCGC CTCACCTGTC CTGATGGCGT CCTCCAGCCT 000480 000481 GGGGTTTCTC TCTCCCTGGA GAAGCTGGTG GTAGTAGCCG GGATTCTGGT CCATCTGCGC CTGGGCCCCA CTCAGCACCA 000560 000561 TCCAGACGCG GGCACGGTGC TCCAGCGGGA CCCCTTTCCG GACATAGCGC TTCACTGAAG GCCGAGAGGA CGGACAGCGT 000640 000641 GTGAGCTGGA CCAGGGGCCT GCGGGGCCCA CGCGTTCCTG CCACACTTTC CACTCTCACC AGTTCTCTTC TTAAATCAAA 000720 000721 TATTAAAGAG ACCCAGAACT TCGTCCATCT CCACCAAAAC TGGTACATAT ACTCCTTTAA AAATTCTGCT CTCCTCTCCC 000800 000801 TCTCAACAGA GCACAAACCA GACTGGCTAC AGAACCGCCC CCACGCCCAC TTCACCATTC AATGCAG |
Predicted Small Protein
Name | ENST00000419199.1_smProtein_149:310 |
Length | 54 |
Molecular weight | 5969.7483 |
Aromaticity | 0.0754716981132 |
Instability index | 75.3754716981 |
Isoelectric point | 6.37701416016 |
Runs | 9 |
Runs residual | 0.00954901058444 |
Runs probability | 0.0400105988341 |
Amino acid sequence | MRSPADSRFLHKFQDGLTAVPASHDAEMGVHPALEEPNRLWSLHNGCKILLQF |
Secondary structure | LLLLLLHHHHHHHLLLLEELLLLLLLLLLLLLLLLLLLHHHHHHLLLLLLEEL |
PRMN | - |
PiMo | - |